Vibrio navarrensis: IF132_03300
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Entry
IF132_03300 CDS
T07785
Name
(GenBank) DNA/RNA non-specific endonuclease
Organism
vnv
Vibrio navarrensis
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Endonuclea_NS_2
RHS
DUF6531
TEN_YD-shell
Endonuclease_NS
Motif
Other DBs
NCBI-ProteinID:
QOD67474
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All DBs
Position
2:757638..761843
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AA seq
1401 aa
AA seq
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MSIQRIVQLTAYDGSLHHFSDQPFAEGKSYRFPTVAVAAQFVERFKLSNLADIEEIARWL
GVQPTVGVYREKCTFADYVTPLSDALTNNRLHVVQIASVNPAGVKPSAPVPAPKVQAAKP
AADGKSAQQESQSSVSQEPQAESSRNHETAGDPVSMVTGEEILTLCDVANHPVLFSRTYR
SSRCDSDSGIGFGWRHSFDLQLFDVQAEDGEVSHWQFVDEMGDTILFPAVNQGAVSYQTY
VGASCFYQNDKYRLVTLKNGVQYKFEHVDEHWLLRQIRPSVLQRVELNYSLKHRLIGVST
NQHPSLEFQYDQRGHLIEVREPHSGRVLAQYRYDPQDCLIAATNQQAQTEQYAYSQSHLI
IRRQRCTGFTHYFEWTGEGSAAKCVRNYGDDQTYDYCFAYQDDRSSFRDTLGNQWLFLHS
AQGKLLEKHSPEGRKWRWDYDHLGRVVAEHFPDGSCVSFQYNQYGQKIAQQHTSGATTRY
QYNQLGQQTMLLHPDGEKQYQHYNSLGQLLWRSATDGTVTEYQYDKFGRLIQSHSARGEK
QQWWWNDNQQLVARQINQTLLRYSYDQHNDLDGIAYPDEMVVAFERDSHGQVVKTKAFNS
KDDTQREVSYQYDDFGRLTQITTPAGRSAIEWGKLAQPEAIIRADGSALAFEYDGERNLT
AITRSDGVQYHLTLSADGHLAQITNFDGICTQYDYDAAGRLAHLRCAERQVAFDYDLNGN
LCRVRAGGEYGLCENYFQFSAGSKLRLASNAKRTIQNQYQSDGLLSEQTQGNHTFVYRYN
ACGQLAEIDLPDGETMILAYTAYGQLQRVQRKECQTAAVQYEYDEMGRICRLYCGGQSEE
RQFDGIGRLNLQRWPEKTRKYHYDAAQHLAIVIDSESGATHYQYDALGQLTRAKSVYIEE
KYHFDGFGHPQGQASQRLGDRLLEHQGWRFQYDAHGNQIKAEGQGQEQSRRFNALNQLVE
VQYDDQLAYYEYDALGRRSRKVTEAGVTEFLWQDSQLIGEYHQGRYRWYFYQPESHIPSM
LVQDGQCYFYQCDHLGTPLRLVTSQGEIVWQAHYETWGTAHIEIEQVTNPLRFQGQYHDA
ETGLHYNLARYYDPRTGRFIQPDPIGLLGGLNHYQYTPNPVMWVDPTGLCAKEDSTLSVD
ALAENPQQTLITSTLPASYQSTTLASSSVGQLSSTTSSKKSTDLEKLGSALSDSVDKNVI
DQNTSDKLYALAEAGVATPAQIKQGLDDGTLLQTPDRLTITDVVDNSKAVWVVDMDGCPV
SVSAVLSNTHAGKRSSIEKKLQQSVGGDERLSDDDGGHLIGHRFMNDQGLKNLFPQNANL
NRGAYKTMENEWADWIAEGCEVRVTVKLDPPGAERPENIVAQYQVFDPATGDRVFKRRHR
FDNKKGEEFKRVNRTDMQNYI
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcaacggatagttcaactcaccgcttacgacggttcactacatcacttctct
gatcagccctttgctgagggtaaatcgtatcgatttccaaccgtagcagtcgcagctcag
tttgttgagcgctttaagctgtcaaatttagcggatatcgaagagatcgcacgttggcta
ggtgttcagccaaccgttggggtataccgtgaaaaatgtacgtttgccgactatgtgacg
ccgcttagcgatgcgttaaccaacaacaggttacatgttgtccagatagctagcgttaat
cccgcgggcgtcaaacccagtgcgcccgtaccagcgccaaaggtgcaggctgcaaaacct
gcagcggatggaaagtccgcgcagcaagagagccaaagcagtgtcagccaagagccccag
gcggaaagcagcagaaaccatgaaacggcaggtgatccggtatctatggttaccggagaa
gaaattctcaccttgtgtgacgtggcgaatcatcccgtcctctttagccgcacttaccgg
tcatcacgttgtgatagcgacagcggtatcggtttcggttggcgtcatagttttgacttg
caattatttgatgtacaagcagaagatggcgaagtgagccactggcagtttgtggatgag
atgggcgatacgattctgtttcccgccgtcaatcaaggtgcggtgagctatcagacttat
gtgggtgccagttgtttttatcagaatgacaagtatcgccttgttaccctgaaaaatggc
gtccagtacaaattcgagcatgtggatgagcactggctgctaagacagatccgccctagc
gttttacaacgagttgaactgaattattcgctcaaacatcgcttgatcggtgtcagcacc
aatcagcatccatctcttgagtttcaatatgatcagcgtgggcatttgattgaagtgaga
gagcctcactcagggcgagtgttggcccagtatcgctatgatccacaagattgccttatt
gctgccaccaatcagcaggcgcaaacagagcagtatgcctactcgcaaagccatctgatc
attcgccgtcagcgctgcacgggttttactcactattttgagtggacgggagaaggctca
gcagcaaaatgcgtgcgtaactatggcgacgaccagacctacgattactgcttcgcatac
caagacgatcgttcaagctttcgtgacacgctaggcaatcaatggttgtttctgcacagc
gcacaagggaagttgcttgaaaaacacagccctgaagggcgtaagtggcgctgggattat
gatcacttaggtagagtagtggctgaacattttcccgacggcagttgtgtgagtttccaa
tacaatcagtatggacaaaaaatcgcccagcaacatacatccggagccaccacgcgctac
cagtacaaccaacttggtcagcagacgatgttgcttcatccggatggtgaaaagcagtac
cagcattacaactcactggggcagttattgtggcgttcggccaccgatggcacggtcacc
gaataccaatacgataagtttggtcgcttaattcaaagtcacagcgcgcgaggtgaaaag
cagcaatggtggtggaacgataatcagcagctcgtagcacgtcaaatcaaccaaacctta
cttcgttacagttatgatcagcacaacgaccttgacggtatcgcctatccagacgaaatg
gtggtcgcctttgagcgagacagccatgggcaggtagtgaagaccaaagccttcaacagc
aaagacgatacgcagcgagaagtgagctatcagtatgatgattttggtcgcctaacgcag
ataacgaccccagcggggcgaagtgccattgagtggggaaagctggcacaaccagaagcg
atcattcgcgccgatggcagtgcgctggcgtttgagtatgacggagagcgaaatctcacc
gcgatcactcgcagtgatggcgtgcaataccatctcactctctctgctgatggacatttg
gcacaaataaccaatttcgacgggatctgtacccaatacgactatgacgctgcaggccgc
ttagcccaccttcgctgcgcagaaaggcaggttgcgtttgattacgatcttaatggcaat
ctttgccgagtgcgcgcgggtggggaatacgggctgtgtgaaaactattttcagttcagt
gctggcagcaaactgcgcttggcgagcaatgccaaacgcaccattcagaaccagtatcaa
agcgatggattacttagcgaacagacacaaggcaatcatacttttgtctatcgctacaat
gcgtgcgggcagttagccgaaatcgacctccctgatggcgaaacaatgatattggcgtac
accgcgtatggccagttgcagcgtgtacagcgcaaagagtgtcaaaccgcggcggtgcag
tatgagtacgacgagatggggcgtatttgccgtctctattgcggcggacaaagtgaagag
aggcagttcgatggcattggccgtttgaatttgcagcgttggccagagaaaacgcgcaaa
taccattacgacgctgcgcagcatcttgccatcgtgatagatagcgagagtggtgcaacg
cactaccaatacgacgcgctcggtcagcttactcgggcgaaatcggtttacattgaagaa
aaatatcactttgatggctttggccatccgcaagggcaagcgagccaacggcttggagac
cgattgctagagcaccagggttggcgttttcaatacgacgctcatggtaatcaaatcaaa
gcagaagggcagggccaagagcagagccgccgctttaacgcactcaatcagttagttgaa
gtgcagtatgatgaccaattagcctattacgagtatgacgcgttaggccgtcgcagccgt
aaagtcacagaagcgggtgttaccgagtttctttggcaggatagccagttaatcggcgag
taccaccaaggtcgataccgctggtatttctaccagccagaaagtcatattccgagcatg
ttggtgcaagatgggcaatgttatttttaccagtgtgaccatcttggtaccccgttacgg
ctagtgacttcccaaggcgagattgtttggcaagcgcactacgagacgtggggcacggca
catatcgagatagagcaagtgaccaacccactgcgttttcaggggcagtaccatgatgct
gaaacgggattgcactacaacctcgcgcgatactacgatccgcgcacaggccgttttatc
caaccagacccgattggtttattgggcgggctgaatcactatcagtacacgcccaatcca
gtgatgtgggtggaccccacagggctgtgcgcaaaagaagatagcacactctctgtcgac
gccttagcggagaatccgcagcaaacgctcatcacgagtacccttccggcgagttatcag
tcgactacgttagccagcagctctgtggggcagctatctagcacaacatcatcgaagaaa
agtacggacctagaaaaactgggttcggcactcagcgattcggttgataaaaacgtgata
gaccaaaacaccagtgataaactgtatgctctggccgaagcgggagtcgctacgccagcg
cagattaagcagggattggatgatggcaccctactacaaacaccagacaggctgaccatt
acagatgtagttgataatagcaaagcagtatgggtagtagatatggacggttgtcccgta
tctgtctcagccgtcttatctaacactcacgctggcaagcggtcgtctatagagaaaaaa
cttcaacagtcggtcggtggtgatgaacggttaagtgatgatgatggtgggcatctgatt
ggtcatcgctttatgaatgatcagggcttgaaaaacctattcccacaaaatgcaaattta
aaccgtggtgcgtataaaactatggaaaacgagtgggcggattggattgcagaaggctgt
gaggttcgtgttactgttaaactcgatccaccaggtgctgagcgcccggaaaacattgtt
gcacaatatcaagtgtttgacccagccaccggagatagggtgtttaagcgccgacaccga
tttgataacaaaaaaggcgaagagtttaaacgtgttaaccgtacagatatgcaaaattat
atttaa
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