Vibrio navarrensis: IF132_03585
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Entry
IF132_03585 CDS
T07785
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00260
Glycine, serine and threonine metabolism
vnv00630
Glyoxylate and dicarboxylate metabolism
vnv00670
One carbon pool by folate
vnv00785
Lipoic acid metabolism
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
vnv01200
Carbon metabolism
Module
vnv_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IF132_03585 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IF132_03585 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IF132_03585 (gcvP)
00670 One carbon pool by folate
IF132_03585 (gcvP)
Enzymes [BR:
vnv01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
IF132_03585 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
RNase_H2-Ydr279
DUF6227
DUF7572
Motif
Other DBs
NCBI-ProteinID:
QOD67523
LinkDB
All DBs
Position
2:complement(828660..831524)
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AA seq
954 aa
AA seq
DB search
MTELLQSLNTQHEFVARHNGPNQSDQQKMLQAINVASLDALIEQTVPAQIRLEKPMQLAQ
AKSEADMLLAMKQFANLNQVKRTFIGQGYYNTLTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLESLLNYQQMVMDLTGMDIANASLLDEATAAAEAMTLCQRAGKSKSKVFFVADDVHP
QTIEVVKTRAKYFGFDVVIGALDALPQTEAFGALLQYPGTTGEVRDLTEIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATREQYKRTMPGRVI
GVSIDAKGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAQGLRTIAR
RTHHMTAILAAGLTKTGFELAHNAFFDTITINTGDQTQALYAKAQAADINLRLLEGQIGI
SFDETTTVADVEALFAIFGVNEAVNALSSDIASNEFAAIPESCRRTSEYLTHPVFNTYHS
ETQMMRYLKKLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGALHPFAPIEQAAG
YTALAEDLKAKLCEITGYDAFSLQPNSGASGEYAGLVAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDENGNVDLADLAEKIEKHKDNLSSIMITYPSTHGVYEEQV
KEVCDMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIENGVEGKEFAVSAADLGSASILPISWAYIAMMGADGLAEATKVAIL
NANYVMERLRPHYPVLYRGKNGRVAHECIIDIRPLKDETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLAELDRFCDAMIAIRQEITAVKEGAWPLEDNPLVNAPHTQVDL
MAEEWTHPYPRELACFPSTATKKSKYWPTVNRVDNVYGDRNLICSCPSIDNYAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcaacacccaacacgagttcgttgctcgccacaacgga
ccgaatcaatctgaccaacaaaaaatgctgcaagcgatcaacgtcgcaagccttgacgcc
ttgatcgagcaaaccgttcctgcgcaaattcgcttggaaaaaccgatgcagcttgcacaa
gcgaaaagcgaagcagacatgctactggcgatgaaacagttcgccaacctaaaccaagtg
aaacgtactttcattggccaaggttactacaacacgctgacaccaaatgtcattttgcgt
aacgtactggaaaatccgggttggtacaccgcctatacgccataccaaccagaaatttct
caaggtcgattggaatcgctgttgaactatcaacaaatggtgatggacctaaccggcatg
gacattgcgaacgcatcgctgcttgatgaagccacggcggcggccgaagcgatgaccctt
tgtcaacgtgcaggtaagagcaagagcaaagtgttcttcgtcgctgacgacgttcaccca
caaaccatcgaagtggttaaaacgcgagccaaatactttggttttgatgtggtcatcggc
gcgctagatgctctgcctcaaactgaagcgttcggcgcactactgcaatacccgggcaca
accggtgaagttcgcgatctcaccgagatcattgctaaagcgcaagcgaacaaaacactg
gttactgttgccactgatttactcgcgtctaccctactcaagccagcgggcgaaatgggc
gctgacgtcgtgatcggcagcgcgcagcgtttcggcgttcctatgggctacggcggtccg
cacgcagcgtttatggccacgcgcgagcaatacaaacgcaccatgccgggccgtgtgatt
ggtgtttctatcgatgccaaaggcaaccaagctctgcgtatggcgatgcaaacgcgtgag
caacatattcgtcgcgagaaagcgacgtcaaacatctgtacagctcaggctctgcttgcc
aacatggcctctttctatgccgtttatcacggcgcgcaaggccttcgcaccatcgcccgt
cgcacgcaccacatgaccgcgattttggcagcgggcctaaccaaaacaggttttgaactg
gcgcacaacgctttctttgacaccatcactatcaacactggtgaccagactcaagcgctt
tacgctaaagcgcaagccgccgacatcaacctacgtttgctcgagggtcagatcggcatc
agctttgacgaaaccaccacggttgctgacgtcgaagcactctttgctatctttggcgtg
aatgaagccgtcaatgctctttcaagtgacattgccagcaatgaatttgccgcgattcca
gaaagctgtcgtcgcacgagtgagtatttgacccacccagtttttaatacctaccacagc
gaaacgcaaatgatgcgttacctgaaaaagcttgaaaacaaagacttctcgctaacacac
ggcatgatcccactcggcagctgcacgatgaagcttaacgcggcggcagagatgattccg
gtcacttggccagaatttggtgctctgcacccatttgcgccgattgaacaagcagcgggt
tacactgcgcttgccgaagatctcaaagctaagctgtgtgagatcacgggttatgacgca
ttctcgctgcaacccaactcgggcgcatctggcgaatacgccggcctagtggcgattcaa
cgctaccatgaaagccgtggcgaaggtcatcgtaacgtctgcttgatcccaagctcagcc
cacggcactaacccagccacagcctctatggtgtcgatgaaagtggtggtagtgaaatgt
gacgaaaacggcaacgttgatctggctgatttggcagaaaaaatcgagaagcataaagac
aatctctctagcatcatgatcacttacccttcaacgcatggcgtgtatgaagagcaagtg
aaggaagtgtgtgacatggttcatgccgctggcggtcaggtttaccttgatggcgccaac
atgaacgcgcaggttggcttgacctctccgggctttattggttcagacgtatcgcacctt
aacttgcacaaaaccttctgtattccacacggcggcggcggcccgggtatgggtcctatc
ggtgtgaaatcgcatcttgcgcctttcctacctggtcacatcgaaaacggtgtagaaggc
aaagagttcgcggtttcggctgccgatctcggtagtgcgtctatcctgccaatttcttgg
gcctacatcgccatgatgggtgccgacggcttagcagaagcgacgaaagtggctatcctc
aacgcaaactatgtgatggagcgtctacgcccgcactaccctgtgctttatcgtggtaaa
aacggccgtgtcgcgcacgagtgcataatcgacatccgtccgctcaaagacgagacaggc
atcagcgaggaagatatcgctaagcgtttgatggactacggtttccatgcgccaaccatg
tctttcccagtggcaggcaccttgatggttgagccaactgaatcggaagatctggcggaa
cttgatcgtttctgtgacgcgatgatcgcgattcgtcaagaaatcactgcagtcaaagaa
ggagcatggccacttgaagacaacccgctggttaatgcgccgcatacccaagtggatctg
atggccgaagagtggacacacccatacccccgtgagttggcgtgtttcccttcaactgca
accaagaaatccaaatactggccgacggttaatcgcgtggataacgtctacggcgatcgt
aatttgatttgctcttgcccgagcattgataattacgctgagtaa
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