Vibrio navarrensis: IF132_03595
Help
Entry
IF132_03595 CDS
T07785
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00260
Glycine, serine and threonine metabolism
vnv00460
Cyanoamino acid metabolism
vnv00630
Glyoxylate and dicarboxylate metabolism
vnv00670
One carbon pool by folate
vnv00680
Methane metabolism
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
vnv01120
Microbial metabolism in diverse environments
vnv01200
Carbon metabolism
vnv01230
Biosynthesis of amino acids
vnv01240
Biosynthesis of cofactors
vnv04981
Folate transport and metabolism
Module
vnv_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IF132_03595
09102 Energy metabolism
00680 Methane metabolism
IF132_03595
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IF132_03595
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IF132_03595
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IF132_03595
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IF132_03595
Enzymes [BR:
vnv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IF132_03595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QOD67525
LinkDB
All DBs
Position
2:complement(832066..833361)
Genome browser
AA seq
431 aa
AA seq
DB search
MNSTYQNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFRCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRQTLEINYDDVRALALEHQPKM
IIAGGSAIPRTIDFAKFRTIADEVGALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEEISKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFNTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGHWIGDVLDGLVDNPEGNAEVEQRVRKEV
KALCGRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcacttaccaaaaccacagcttggaaaattttttctccactaacttgtcagca
accgacgatgcggtatttgctggtatccaagccgaattcacccgccaaaacgaacagatt
gagctcatcgcttctgagaacattgtctcaaaagcggtaatgcaagcccaaggcacctgc
ctgaccaacaaatacgcagaaggttatcccggtcgccgctattacggtggttgtgaacac
gttgataccgtcgaagcgattgctattgagcgcgcgaaaaaactttttcgttgtgagtac
gcaaacgttcaaccccattctggcgcgcaagctaacggggccgttaagctcgctctcctt
caaccgggtgacaccattttaggtatgtcgcttgatgcaggtggccatcttacccacggc
gctcgccctgcgctttcaggcaaatggttcaacgcggtgcaatacggggtggatcgccaa
acactcgagattaattacgatgacgttcgcgcgttagcgcttgagcatcaaccgaagatg
atcatcgcaggcggcagtgctattccacgcaccatcgattttgccaagttccggacgatt
gccgatgaagttggcgcgctactgatggtcgatatggcgcacattgctggcttagtcgca
accggcgctcaccctagcccactaccacatgctcatgtagttacgacgacaacgcacaaa
actctgcgcggccctcgcggcggtatgatcttgaccaatcacgaagagatcagcaaaaaa
atcaattctgcggttttccccggtttgcaaggcggaccattaatgcacgttatcgcggct
aaagcggtggcgtttggtgaggcgcttggccctgagttcaacacttatatcgattcggtg
atcaataacgcaaaagttctggctgaagtgttgcaaactcgcggctgtgacattgtgact
ggcggaacggacacgcacttgatgctggtggacctgcgtccgaaaggactaaaaggtaac
aaagcagaagaagcattagagcgtgcagggatcacatgtaacaaaaatggcatcccattc
gacacggaaaaacctatgattacatcgggtatccgtttgggtacgccagcaggcaccagc
cgaggctttggcgcagaagaattcaaactcattggtcattggattggcgatgtactggat
ggattggttgacaaccctgaaggcaacgctgaagtagagcaacgcgtgcgcaaagaagtg
aaagcactatgcggccgcttccctctttaccaataa
DBGET
integrated database retrieval system