Vibrio navarrensis: IF132_05160
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Entry
IF132_05160 CDS
T07785
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_05160
Enzymes [BR:
vnv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IF132_05160
DNA repair and recombination proteins [BR:
vnv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IF132_05160
Prokaryotic type
IF132_05160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QOD67813
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All DBs
Position
2:complement(1192962..1194476)
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AA seq
504 aa
AA seq
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MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQ
AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQ
HDIVWHEFPYAAVIRRAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAATLGLRSDIP
ATWQSKQAGMQTGGSDMAWATLEDFFARRGRDYYRSISSPSLARHACSRMSPYLAWGNIS
LREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQS
SQAPTAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTY
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPV
PLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDRLWQWQKLPAVQAEAMRIL
ARHVRQAKPRTSPRQPNKRQPEMD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcaatctggtatggctcaaacgtgacctaaggctgaccgaccacgcgcca
ctacaagcggcgttaacttcggggcgaccgacgttactactctatctgtttgagccaatg
ctgcttggcgatgcgcattacagcgaacgacactggcgctttgtgtggcaatcattgcaa
gccatcaatcgtgatttggcgcagagcaaaggggaggtgttgatcgtcacatccgattgg
caaacctgctttgcacgtattgctgagcgctacgccattgaggcgatttattctcatcaa
gaagtcggtttagcctgcacttttcagcgcgatcttgcgctggcacagtggtgccagcaa
cacgacatcgtctggcatgaatttccttatgctgccgtgatccgcagggcgcaaacccga
aaaaattgggatgaacattggcagcaagtaatgcgctccccttgctgcgatcctgattta
acacgcgccaattggctgaagctggatgccgcaacgcttggtttgcgcagcgatatccct
gccacatggcagagtaaacaagcgggcatgcaaactggcggcagtgatatggcgtgggcg
acgctggaggattttttcgcgcgtcgagggcgagattattaccgctccatctcaagtccg
agcttagcgcgccacgcatgctcgcggatgtcgccttatcttgcgtggggaaatatctca
ctgcgggagatgtatcaaaccttgctcaaacactggtcggtagcgggatttcgccgcagc
ctgattgcgctttcatcacgtctgcattggcactgtcactttatccaaaaatttgaatca
gaatgtgagatggagtttcgctgcgtcaaccgcgcttatgactcactcttacagcaatca
agccaagcccccaccgcgcagttagccgcttggcaaactgggcacaccggcattccactg
gtggatgcctgtatgcgctgcttaattcaaaccgggtacctcaattttcgcatgcgcgcg
atgttggtgagcgtgttaactcatcatatgaatgtcgattggcgagcgggcgtgacttat
ttggcgcaactgttcctcgattttgaaccgggcattcattatccgcagtttcaaatgcaa
gcaggggtcacgggtaccaatactatccgcatttataacccgactaagcaagcacaagag
catgacagtgaagggcagtttattcacaaatgggtgccagagttggcgcaagtgcctgta
ccgctgctctttgaaccctggctgatgacaccgcttgaagcgcagatgtatcaagtaccg
cttgagagcccttacctcaagccggtgatggatttggaagccagtgccaagcaagcacgg
gatcgcttatggcagtggcagaaactgcctgcggtacaagccgaagcgatgcgtatcctc
gcgcgccatgtgcggcaagctaaaccgagaacttcgccgcgacaacccaacaagcgtcaa
ccggagatggattaa
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