Vibrio navarrensis: IF132_09350
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Entry
IF132_09350 CDS
T07785
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vnv01002
]
IF132_09350
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
IF132_09350
Peptidases and inhibitors [BR:
vnv01002
]
Cysteine peptidases
Family C82
IF132_09350
Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IF132_09350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QOD69045
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All DBs
Position
1:complement(567584..569134)
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AA seq
516 aa
AA seq
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MSKSLIVLLLVLLAPPLWALTQQEDTHWRIENSAALAYVQYPHQVEQLYREYGHQRIWTD
ARAIEQFEFQLELVKTAGVSPYFEHQIAKLNRYKAQQQWLGYDILATDILLSYLSYLDKL
TRNGKDWLFASPLSQSLPAPNPRSLSNLAQEIRSDSLADYIASLRSPLQLNPQFEQRYRK
LWNVQHQATTEYLPQGLKKVGDSLTDKAILLRRLQMVGIDTSASSNTEDLYDESLAKAIK
QFQKMHGLAQDGIIGPATVKWLNVSPAQRLHSMALNAERSRLWPQERDLLILVNVPGYEM
QFWYKGEEVFESKVVVGKISRKTPIMEGKMDGIVLNPVWNVPNKIMVKDILPKLKRDQNY
LKKQNIEILQAWDSETTIDPESIDWSRVSRHNFPYKMRQLSGSTNALGLYKFNIPNKRAI
FLHDTPSKRLFSRDHRAFSSGCVRVENADQFAHLLLQTQGLEEELTRQSAWQEPNNMIPL
KTRVPVHIIYQTVWFDGEEINYRDDIYQFDLIRQQG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaagtcgttgatagttttattgctagtgttgctcgctccacctttgtgggcatta
acccagcaggaagatacccattggcgtattgaaaattctgctgctcttgcctatgtgcaa
tatcctcatcaagtggagcagttgtatcgagagtacgggcaccaacgaatttggacggat
gcgagagcgattgagcaatttgagtttcaactggagttggtcaaaacggccggagtgagt
ccttattttgaacatcaaatcgctaaactcaatcgctataaagcgcaacaacagtggttg
ggttatgacattctcgccaccgatatcttgctttcctacctgagttatctcgacaaactg
acgcgcaatggtaaagattggctgtttgcttcgccgttgagtcaaagtttgcccgcgcct
aatccacgatcactaagcaatctcgcacaagaaattcgctcagattcgcttgccgattac
atcgcctctttgcgctctccgttacagcttaatcctcaatttgagcagcgttatcgcaag
ttatggaatgtacagcatcaagccacgacagagtatcttccacaaggtctgaaaaaagtc
ggtgactcccttacggataaagctattttgctcaggcgtttgcaaatggtcggtattgat
acctccgcaagctccaatacagaggatctctatgacgagtcgctcgctaaggccatcaag
caatttcaaaagatgcatggcctagctcaggatggaatcataggtcctgccaccgtcaaa
tggctgaatgtctcgccagcacaacgcttgcactcgatggcactgaatgcggaacgttca
cgcttatggccgcaagagcgagacttgctcattctggtcaatgtgcctggttatgaaatg
caattttggtacaaaggcgaagaggtattcgaatcgaaagtggtggtcggaaaaatcagc
cgcaaaacaccaatcatggaaggaaaaatggacggtatcgtgcttaacccggtttggaat
gtgccgaacaaaattatggttaaagatattttgcctaagctgaagcgcgaccaaaactat
cttaaaaaacaaaatattgagattttacaagcgtgggactctgagacgaccatcgaccct
gaaagcatcgattggtcacgtgtttcgcgacacaatttcccgtacaaaatgcgtcagtta
tcaggcagcacaaacgccttaggcttgtataagtttaacattcccaataaacgggccatt
ttcctacatgacacgccctctaagcgtctgttctccagagatcatcgggcgtttagttcc
ggctgtgtgcgggtggaaaatgccgatcaatttgcccatttattactgcaaacccaaggg
ctagaagaagagctcacgcggcagtctgcttggcaagagcctaacaacatgatcccgctc
aagactcgcgtgcctgtgcacattatttatcaaacggtttggtttgatggtgaagagatc
aattatcgtgacgatatttaccaattcgatttgattcgccagcagggatga
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