Vibrio navarrensis: IF132_09390
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Entry
IF132_09390 CDS
T07785
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnv03032
]
IF132_09390 (gyrA)
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_09390 (gyrA)
Enzymes [BR:
vnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IF132_09390 (gyrA)
DNA replication proteins [BR:
vnv03032
]
Prokaryotic type
DNA Topoisomerases
IF132_09390 (gyrA)
DNA repair and recombination proteins [BR:
vnv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IF132_09390 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QOD69053
LinkDB
All DBs
Position
1:complement(576358..579036)
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AA seq
892 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGCLAYINNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKI
YMRSKAEIEVEKNGKETIIVTEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIINLIRQAPTPAEAKAGLIARGWELGNVA
AMLERAGTDAARPEWLEPQYGIRDGLYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKAL
LDEIAELMHILASTERLMEVIREELEAVRDAFGDARRTEITAASHDIDLEELIAREDVVV
TLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKDEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSADKYIFMATGDGTVKKTSLD
QFSNVRANGLIALNLRDDDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDEHGQP
VLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYGKRT
SLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVDEGDEFMMITDAGTLVRTRVAEVSQVG
RNTQGVTLIRTAEDESVVGLQRIEEVEEVELLEGDEAQETDVVVDDTQDEQE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagctgagaggttca
tacctcgactacgcgatgtccgttatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagtgcaccgccgcgtattgttcgcgatgagtgtactaggcaatgactggaat
aaaccatataaaaaatctgcccgtgtagtcggcgacgtaatcggtaaatatcacccacat
ggtgacagtgcggtatacgatactattgttcgtatggcacagccgttttcgcttcgttat
atgctggtcgatggccaaggaaactttggttcgatcgatggtgactccgcggcggcaatg
cgttataccgaagttcgcatggcgaaaattgcccatgaacttctagcagacctagataaa
gaaaccgtggattatgtgcccaactacgatggcacagaacagatcccagcggtgcttcca
accaaaattcctaacctgctggtcaacggttcgtccggtatcgcagtaggtatggcgacc
aacattcctccgcacaacttgacggaagtgattgatggctgcctggcgtatatcaacaac
gaagccatcactattgatgagctgatggattacattcctggaccagatttcccgactgct
gcgctgattagcggacgtaaagggattattgacgcgtacaaaacagggcgcggcaaaatc
tacatgcgttcaaaagcggaaatcgaagtcgagaagaatggcaaagaaaccatcatcgtt
actgagatcccataccaagtaaacaaagctcgcttgattgaaaagatagctgagctggta
aaagagaagaaagtcgaaggcatcagtgcactgcgcgacgagtctgataaagacggtatg
cgtattgtgattgaatgtaagcgagatgctgtgggtgaggtggttctcaacaacctttac
gccaacactcaactgcaaacgaccttcggcatcaacatggtggcgctggacaatggccaa
ccgaagctattcaacttgaaagagatgttgaagtgtttcgttgaccaccgtcgtgaagtg
gtcactcgccgtaccatttttgaactgcgcaaagcgcgtgagcgcgcccacattcttgaa
ggtttggcgctggctttggccaacattgatgaaatcattaacttgatccgtcaagcgcca
acaccggctgaagcaaaagcaggcctgattgctcgtggttgggaactgggtaatgtagca
gcgatgctagagcgcgcgggtaccgatgcagcccgcccagaatggctagagcctcaatac
ggtattcgtgatggcctgtacttcttaaccgagcaacaagcacaagctattctcgacctt
cgcctgcacaagctaactggccttgagcacgagaagatccttgatgaatacaaggcactt
cttgacgaaatcgctgagctgatgcatatccttgccagcactgagcgtttgatggaagtg
atccgtgaagagctagaagcggttcgcgatgcatttggcgacgctcgtcgcactgaaatt
accgcagcaagccatgacattgatcttgaagagctgattgctcgtgaagatgtggttgtg
acgctgtcgcacgaaggctatgtgaagtaccagttactgagcgactacgaagcacagcgt
cgtggcggtaaaggtaagagcgcaaccaagatgaaagatgaagactacatcgagcgtctt
ctggttgccaacacgcacgataacattctgtgcttctccactcgtggtaaaacttatcgc
ttgaaagtgtatcaactgcctctcgcaagccgtacggctcgtggtaagccaattgttaac
ttgttgccgctggaagaaaatgaacgtattaccgctattctaccggtaacagaattcagc
gcagacaaatacatctttatggcgactggagacggcacggttaagaagacttcgcttgat
cagttctctaatgtccgtgcaaacggtcttatcgcgcttaacctacgtgatgatgactca
ctgattggtgtggatattacggacggcgaaagcgaaattatgctgttctctaaattcggc
aaagtagtgcgctttaaagaatcagaagaaacagcggttgtcgatgaacatggtcaacct
gtactggatgaaaatggccagccagagatcaagttcaaaggcgtaagaccgatgggccgt
actgccgcgggtgtacgaggcatgaaactggccgatggtgaccaagttgtatcgctcatc
gtacctaagacagaaggggacgtgctaaccgtcactgaaaatggttacggtaagcgtacc
agcctgtctgaatacccaaccaaaggtcgtggtactcagggcgtggtttcgatcaaagtc
tctgaacgcaacggcagcgtcgtcggtgcggttcaagttgacgaaggcgacgagttcatg
atgatcaccgatgccggtacactggttcgtacccgtgtggcagaagtgagccaagtgggc
cgtaacacgcaaggcgtgactctgatccgtactgcagaagacgaatcggtggttggtcta
caacgtattgaagaagtcgaagaggtggaattgctagaaggcgatgaagcgcaagagact
gatgtggttgttgatgatactcaagacgagcaggaataa
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