Vibrio navarrensis: IF132_10140
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Entry
IF132_10140 CDS
T07785
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IF132_10140 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_10140 (xthA)
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
IF132_10140 (xthA)
DNA repair and recombination proteins [BR:
vnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IF132_10140 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
DUF3014
Motif
Other DBs
NCBI-ProteinID:
QOD69186
LinkDB
All DBs
Position
1:745556..746362
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AA seq
268 aa
AA seq
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MKVVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVADIEAMGYKVYFHGQK
AHYGVALLCKQEPLSLQKGFPTDNDDHQKRMIIGTFLHENGEKVTILNGYFPQGDNVEHE
TKFPYKRQFYQDLMGYLNTHHSSDEKLIVMGDINISPIDADIGIGEVNRKRWLKTGKCSF
QPEERQWLKTLLDWGLEDTFRRLHPTVDDKFSWFDYRSRGFDDNRGLRIDVILATPSLAS
SCVESDVDYELRGIDKPSDHAPIWAVFN
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagtcagctttaatatcaatggcttgcgtgcccgtctccatcaactgcaagcc
ctaatcgataaacaccagcccgatgtcattggtctgcaagagattaaggtacacgatgaa
gcctttccggtcgctgatattgaggccatgggatacaaagtctattttcatggacagaaa
gcgcactacggtgtcgctctgctgtgtaaacaagaaccgctgtcgctgcagaaaggcttt
ccaacggacaacgatgatcaccaaaagcgtatgattatcggcacttttttgcatgaaaat
ggcgaaaaagtgacgattttaaacggttactttccgcaaggggacaacgttgaacatgag
actaaatttccttacaaacgccagttttatcaagacctaatgggctacttaaatacccac
cacagtagcgacgaaaaattgatcgttatgggggatatcaatatcagcccaattgacgct
gacatcggcatcggtgaagtcaaccgcaaacgctggctcaaaacaggcaagtgctctttc
caaccggaagaacgtcaatggctaaaaacattgctcgattgggggttggaagacacgttc
cgtcgacttcatccgacggtcgacgacaagttctcttggttcgactatcgctcacgtgga
tttgatgataatcgtggtctgcgtatcgacgtgatcttagcaaccccgtctctcgccagc
agttgtgtggagtcggatgtcgactatgaactgcgcggcatcgacaagccctcagatcat
gcgccaatttgggcggtttttaattag
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integrated database retrieval system
