Vibrio navarrensis: IF132_10220
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Entry
IF132_10220 CDS
T07785
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00541
Biosynthesis of various nucleotide sugars
vnv01100
Metabolic pathways
vnv01250
Biosynthesis of nucleotide sugars
Module
vnv_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IF132_10220 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vnv01005
]
IF132_10220 (kdsB)
Enzymes [BR:
vnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
IF132_10220 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
vnv01005
]
Lipid A
IF132_10220 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Peptidase_M29
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
QOD69202
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Position
1:complement(766585..767343)
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AA seq
252 aa
AA seq
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MSFTVVIPARYQSSRLPGKPLADIAGKPMIQWVYEQAIQAGAQDVIIATDDERVADAVVA
FGGKVCMTSPNHESGTERLAEVVKSMGIADDHIIVNVQGDEPLIPPAIIRQVADNLAAST
APMATLGVAITNEEEVFNPNAVKVVTDKEGYALYFSRATIPWDRDAYARGEKLPPQALMR
HIGIYAYRAGFINTYVNWQPSSLEKIECLEQLRVLWYGEKIHVALAKEAPPAGVDTPADL
ELVRHIVSQANK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacggttgttattcctgctcgttaccagtctagccgtctgccgggcaagcca
ctggcggatattgcgggtaaaccaatgattcagtgggtttacgaacaagcgatccaagca
ggtgcgcaagatgtgattattgcgaccgatgatgagcgtgttgctgatgctgttgttgct
tttggtggcaaagtctgtatgacgtcaccgaatcatgaatcgggtaccgagcgccttgcg
gaagtggtgaaaagcatgggcattgccgacgatcacattattgtgaatgtgcagggtgat
gagccgctgattccaccagcgatcattcgtcaagtggcggataatttagccgcgagcact
gcgcctatggcgactcttggcgttgcgataaccaacgaagaggaagtgttcaatcccaat
gcggtgaaggttgtaacagacaaagaaggctatgcactttattttagccgcgcaaccatt
ccctgggatcgcgatgcgtatgcgcgcggtgaaaaactgccgcctcaggcattgatgcgt
cacattggtatctacgcttaccgcgcaggttttatcaatacgtacgttaactggcaacca
agctcattggaaaagatcgagtgccttgagcaactacgtgtgctctggtacggtgagaaa
attcatgttgcactggcaaaagaagcgccaccggcgggcgtggatacccccgcggatctt
gagcttgtaaggcacattgttagccaagcaaacaagtaa
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