Vibrio navarrensis: IF132_10235
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Entry
IF132_10235 CDS
T07785
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IF132_10235 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vnv02000
]
IF132_10235 (msbA)
Enzymes [BR:
vnv01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
IF132_10235 (msbA)
Transporters [BR:
vnv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IF132_10235 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_24
RsgA_GTPase
nSTAND3
AAA_29
APS_kinase
AAA_25
Zeta_toxin
DEAD
MMR_HSR1
SLFN-g3_helicase
AAA_30
G-alpha
AAA_18
ABC_membrane_2
TniB
ATPase
AAA_15
ABC_ATPase
Glyco_hydro_3_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QOD69205
LinkDB
All DBs
Position
1:complement(768510..770261)
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AA seq
583 aa
AA seq
DB search
MSITADESTWRTFKRLWTFIRLYKSGLAVAVVALVINAVSDTYMVSLLKPLLDEGFGSAE
SDFLRTLPLIIFAMMFIRGVSSFISAYCLSWVSGNVVMQIRRMVFNHYMQMPVSFFDREK
SGSLLSRITYDSEQVSAATSQALVSIVREGASIIGLLVLMFYNSWQLSLVLILVAPVVAW
GIGVVSKRFRKISKNMQTIMGVVTSSAEQMLKGHKVVLSYGGQDVEKQRFDKVSNQMRQQ
SMKLVTAQAAANPIIQMIASVAIVVVLYLASVDSIKEQLTPGTFTVVFSAMFGLMRPLKA
LTSVTSQFQRGMAAAQTLFALVDIEPEKNHGTHTVERAEGFVAVKDISFTYQGTEKPALQ
HVSFDIPKGKTVALVGRSGSGKSTIANLFTRFYDVDEGSIELDGVDIRDYELKNLRTHFA
LVSQNVHLFNDTLANNIAYAAEDKYSRADIERAAELAHAMEFISKMEHGLDTVIGENGAS
LSGGQRQRIAIARALLRDAPVLILDEATSALDTESERAIQSALDELQKDKTVLVIAHRLS
TIEQADQILVVDDGTIIERGSHAELIAKDGAYAQLHKIQFGDS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattacagcagatgaatcaacttggcgcacttttaagcgtctgtggacttttatc
cgtctttacaaatctggattagccgttgccgttgttgcattggtgattaacgccgtttct
gatacctacatggtttcgttgctcaaaccgcttcttgatgaagggtttggcagtgccgaa
tcagacttccttcgtaccttgccattgattattttcgccatgatgttcattcgtggtgtc
agcagttttatctctgcgtattgcttgagttgggtctctgggaacgtggtgatgcaaatc
cgtcgtatggtgtttaaccactatatgcaaatgccagtctcgttttttgatcgtgaaaaa
tcgggtagtttgctgtcacggataacctacgattcagaacaggtctcagctgcaaccagt
caggcattggtaagcatagtgcgtgaaggcgcaagtattattggcttgttagtactgatg
ttctacaacagctggcagctttctctggtgttgattttggttgcccctgttgtggcatgg
gggatcggcgtggtgtctaagcgctttcgtaaaatctccaaaaatatgcaaaccattatg
ggtgttgttaccagttcagcggaacagatgctcaaagggcataaagtggtgctgagttat
ggtggtcaggacgttgaaaagcagcgctttgataaagtcagcaaccaaatgcgtcagcag
agcatgaagcttgtcacggcacaagcggccgctaacccgatcattcagatgattgcatcg
gttgccattgttgtggtgctttatttggcgagcgttgactcaataaaagagcaactgacc
cccgggactttcactgtagttttctctgcgatgtttgggctcatgcgcccgttaaaagcg
ctgacaagtgtcacttcgcagttccaacgtggtatggccgcggcgcagacgctgtttgcg
ctggtggatattgaaccggagaaaaaccacggaactcatacagtagagcgcgcagaaggg
tttgttgcggtaaaagatatctcgtttacttatcaaggcacggaaaagccggcgctgcag
catgtctcttttgatataccgaaaggcaaaacggtagcgttggttggccgttctggttca
ggcaaaagtaccatagcgaatctgttcacccgtttttacgatgtcgatgaaggctcaatt
gagctagatggcgttgatattcgtgactatgaactgaaaaatttacgcactcactttgct
ttagtatcacaaaatgtccacctgtttaacgataccttggcgaacaatattgcttatgct
gcggaagacaagtatagccgtgccgatattgaacgtgccgctgaactggctcatgcgatg
gagtttatctccaaaatggaacatggtctcgatacggttatcggtgaaaatggtgccagt
ttgtctgggggccagcgtcaacggattgctatcgctcgggcattgctgcgtgatgcgcca
gtactgatcctcgatgaagcaacttctgctttggatactgaatcagaaagggcaattcaa
tctgcattagatgagttgcaaaaagacaaaaccgtcttggtcattgcgcaccgcttgtca
accattgaacaagcagaccagatcttagtggtcgatgacggaaccattatcgaacgaggc
tcgcacgctgagctgatcgccaaagatggcgcttatgcccagctgcataagattcagttt
ggtgactcctag
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