Vibrio navarrensis: IF132_11520
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Entry
IF132_11520 CDS
T07785
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00541
Biosynthesis of various nucleotide sugars
vnv01100
Metabolic pathways
vnv01250
Biosynthesis of nucleotide sugars
Module
vnv_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IF132_11520 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vnv01005
]
IF132_11520 (kdsA)
Enzymes [BR:
vnv01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
IF132_11520 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vnv01005
]
Lipid A
IF132_11520 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QOD69430
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All DBs
Position
1:complement(1049710..1050561)
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AA seq
283 aa
AA seq
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MEQKIVQVGDIQVANDKPFTLFAGMNVLESRDLAMQICEHYVKVTDKLGIPYVFKASFDK
ANRSSVHSYRGPGLEEGMKIFQELKETFGVKIITDVHTEAQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFMSPGQVGNIVEKFAECGNDKIILCERGSCHGYDNLVVD
MLGFGVMKNASKGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEA
HPNPDKARCDGPSALPLDKLEPFLAQMKALDDLVKSFPQIDIK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaaatcgttcaagttggcgacattcaagttgcgaacgacaagccgtttacc
ctgtttgctggtatgaacgtgctcgaatcccgtgatcttgccatgcagatctgtgaacac
tacgtgaaagtgacagacaagctgggtattccttacgtgttcaaagcctcatttgataag
gcaaaccgcagttcagttcactcttaccgtggccccggcctcgaagaggggatgaaaatc
ttccaagagctcaaagagacgtttggcgtgaagatcattactgacgttcacaccgaagca
caagctcagccagtcgccgacgtggtggacgttatccagttgcccgcgtttcttgctcgt
caaaccgacctggttgaagcgatggccaaaacgggcgcagtgatcaacgtcaagaagccg
caatttatgagcccgggtcaagtgggtaacatcgttgagaagtttgccgagtgtggtaac
gacaaaatcattctttgtgaacgcggctcgtgccatggctacgacaatcttgtggtggat
atgctcggctttggtgtgatgaaaaacgcttcaaaaggcagcccaatcatttttgatgtg
acgcactcactgcaaatgcgcgatccatcgggtgccgcttctggtggtcgtcgtgaacag
accgtcgaactggccaaagcgggcttggcaactggcatcgcaggtctatttatcgaagcg
catccaaatccagacaaagcacgttgtgacggcccatcggcattgccactggataagctt
gagcctttcctcgcacaaatgaaagcgttggatgatttggtgaaaagtttcccgcagata
gacatcaaataa
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