Vibrio navarrensis: IF132_11735
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Entry
IF132_11735 CDS
T07785
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00550
Peptidoglycan biosynthesis
vnv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IF132_11735
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vnv01002
]
IF132_11735
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
IF132_11735
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IF132_11735
Peptidases and inhibitors [BR:
vnv01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
IF132_11735
Peptidoglycan biosynthesis and degradation proteins [BR:
vnv01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
IF132_11735
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Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QOD69454
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Position
1:1078584..1079765
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AA seq
393 aa
AA seq
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MNKTTKLVKSILVSSLAFSATLAHSVSAAPVVVPDAPQIAAKGFVLMDYHSGKVLAEKEM
DTKLSPASLTKMMTSYVIGQELGRGNINLEDDVVISKNAWAKNFPDSSKMFIEVGTTVKV
KELNRGIIIQSGNDACVAMAEHIAGSEDAFVDLMNAWASSIGMNNTHFANVHGLDDPNLY
STPYDMALLGQALIRDVPDEYRIYAEKKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTDN
AGYSLVSSATEGKMRLIAVVMGTKDMNARKSESKKLLSYGFRFFETVAPHKAGETFVEEK
IWMGNKDTLALGVNEDTYVTLPRGQAKNLTASFVLEKELQAPIKKGDIVGKLYYQADGED
VAQYPLMALETVEEGSLFSRLWDYIVLLLKSLF
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacgacaaaacttgtgaaatctattctcgtttcttcccttgcattttctgca
acgctagctcactcagtttctgctgctcccgtcgtggttccagacgcaccacagatcgcc
gcgaaaggttttgttctaatggattaccattcaggcaaggttctagctgaaaaagagatg
gacactaaactctcgccagccagcctgaccaaaatgatgaccagctatgtcattggccaa
gagttaggccgaggaaacatcaaccttgaagacgatgtggtgatcagcaaaaacgcttgg
gccaaaaacttcccggattcgtcaaaaatgttcattgaagtcggtaccacggtcaaagtc
aaagagcttaaccgcggcatcattattcaatccggtaacgatgcatgcgtcgccatggca
gagcacatcgccggttcagaagatgctttcgttgatctgatgaacgcttgggcaagctca
atcggcatgaacaatacccactttgccaacgtgcatggtctagacgatccaaatctttac
tcgactccttatgatatggcccttttaggtcaagcgctgatccgtgacgtgcctgatgag
taccgtatctacgctgagaaaaaattcacttacaacggcatcactcagtacaaccgcaac
ggtctgctgtgggataagagcatgaacgtggacggtatcaaaactggccatactgataac
gcaggttacagcttggtcagctcagcaaccgaaggaaaaatgcgtttgatcgcggttgtg
atgggtaccaaagatatgaacgcccgtaaatctgagagtaaaaaactgctcagttacggc
ttccgctttttcgaaactgtggcaccgcacaaagcgggagaaacattcgtcgaagaaaaa
atctggatgggcaacaaagacaccttggcgctcggtgtgaatgaagatacttatgtgacc
ctaccacgcggacaagcaaaaaatctgaccgctagctttgtactggagaaagagctacaa
gccccaatcaaaaaaggtgacatcgtcggtaagctttactatcaagccgatggtgaagat
gtcgcgcaatatccattgatggcattggaaaccgtcgaagaaggcagcctgttcagccga
ctatgggattacattgtgctgctacttaagagcttgttctaa
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