KEGG   Vibrio navarrensis: IF132_11920
Entry
IF132_11920       CDS       T07785                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vnv  Vibrio navarrensis
Pathway
vnv00740  Riboflavin metabolism
vnv01100  Metabolic pathways
vnv01110  Biosynthesis of secondary metabolites
vnv01240  Biosynthesis of cofactors
vnv02024  Quorum sensing
Module
vnv_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vnv00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    IF132_11920 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IF132_11920 (ribD)
Enzymes [BR:vnv01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     IF132_11920 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     IF132_11920 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QOD69488
LinkDB
Position
1:complement(1116475..1117587)
AA seq 370 aa
MNPSPFTAFDYQMMTRAIALAKRGIYTTAPNPNVGCVLVRDGEIVGEGYHARAGEPHAEV
HALRMAGEKARGATAYVTLEPCSHYGRTPPCAEGLTKAGVAKVIGAMQDPNPQVAGRGFQ
MLRDAGIDVHVGLMEAEAVALNPAFIKRMQTGMPFVQLKMAASLDGQSALSNGQSQWITS
ANARRDVQRFRAKAGAILSTSKTVIEDNASLNVRWSELPASVQAHYEESDLRQPVRVILD
RQSQLTSSLKLFQTPGERVIVSPLGDLAPEFDEQGCLDLTRTLQSLTHKFNVNHVWVEAG
ATLAGALLSKGLVDELIVYLAPKLMGSDGRGLIGALGLSNMAQVMDLTIKDVRMVGPDIR
IIATPKEKEN
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaacccatccccatttaccgcttttgattaccaaatgatgactcgggcgattgccctt
gccaagcggggcatctataccactgcgccaaacccgaatgtgggctgtgtgttggtgcgt
gacggagaaattgtcggcgaaggttatcacgcacgagctggcgagccacatgcggaagtg
catgccctgcgcatggcgggcgaaaaagcacgcggcgcaacggcgtatgtgaccttagag
ccttgttctcactatggccgtactccaccgtgtgccgaaggcctgactaaggcgggcgta
gcgaaagtgattggtgcgatgcaagatcccaatccgcaagtggccggacgcggttttcaa
atgctgcgagatgccggtattgacgtgcacgtcggcctcatggaagccgaagctgtcgct
ctcaaccctgcttttattaagcgcatgcaaacgggcatgccgtttgtgcagttgaaaatg
gcggcatctttagatgggcaaagtgcgcttagcaacggtcaaagccagtggatcacctcc
gcgaatgcccgtcgtgacgtacaacggtttcgcgccaaagcgggagcgattttatcgacc
agtaaaaccgtgattgaagataacgcctcactcaatgtgcgttggtctgagctgcccgct
tcagtgcaagcgcactatgaagaaagtgacctgcgccagcctgtgcgagtgattttggat
cgtcagtcgcaactcacttcttcgctcaaacttttccaaacgcctggagaacgagtgatc
gtcagtccacttggcgatcttgccccagagtttgatgagcaaggctgtctggatctgact
cgtacgctgcaaagccttacccacaaattcaacgtcaatcatgtctgggttgaagctggg
gccactttggctggtgctctgctcagcaaaggtttggttgatgagttgattgtctaccta
gcccctaagttaatgggcagtgatggtcgcgggctgattggcgcacttggtctgagcaat
atggcgcaagtgatggatttaaccattaaagatgtacgcatggtcggccctgatatccgc
atcatcgcgactcctaaagagaaagaaaattaa

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