Vibrio navarrensis: IF132_12720
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Entry
IF132_12720 CDS
T07785
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IF132_12720 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_12720 (ung)
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IF132_12720 (ung)
DNA repair and recombination proteins [BR:
vnv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IF132_12720 (ung)
Prokaryotic type
IF132_12720 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QOD69632
LinkDB
All DBs
Position
1:complement(1295029..1295709)
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AA seq
226 aa
AA seq
DB search
MTQELTWHDVIGAEKQQAYFQQTLSFVDAERQAGKVIYPPAKDVFNAFRFTEFNQVKVVI
LGQDPYHGPNQAHGLCFSVLPGIKPPPSLVNMYKELAQDIEGFQIPAHGFLQSWAEQGVL
LLNTVLTVEQGKAHSHATSGWEVFTDRVIEAINQHQQGVVFLLWGSHAQKKGHFIDRNKH
YVLAAPHPSPLSAHRGFLGCRHFSQTNQLLSQQGKTPIHWHLPMTV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggaactgacctggcacgatgtaattggtgctgaaaagcaacaggcgtatttt
caacaaacactcagttttgtggacgcagagcgtcaggccggaaaagtcatttaccctccg
gccaaagacgtgttcaacgccttccgttttacggaatttaatcaagtcaaagtggtcatt
ctcggccaagacccgtaccacgggcctaatcaggcgcatggcctgtgcttttctgttctc
cccggaatcaagccgccgccatctttggttaatatgtacaaagagttggcacaagatatc
gaaggctttcagataccagcacacggttttttacagagttgggcagagcaaggtgtcctg
ctgttgaatacggttttgaccgtggagcaagggaaagcgcactcgcacgcaaccagcggg
tgggaagtgtttaccgaccgggtcatcgaggcgatcaaccagcatcagcaaggcgtggtt
ttcttactttgggggtcgcatgcgcaaaaaaagggccacttcattgatagaaataagcac
tatgtgctcgcggccccgcatccctctccgctctctgcgcaccggggttttttaggttgc
cgccatttttctcaaacgaatcagttgctttctcaacaaggaaaaacgccaatccactgg
catttaccgatgacggtttaa
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