KEGG   Vibrio navarrensis: IF132_13105
Entry
IF132_13105       CDS       T07785                                 
Name
(GenBank) general secretion pathway protein GspB
  KO
K02450  general secretion pathway protein A
K02451  general secretion pathway protein B
Organism
vnv  Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:vnv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vnv02044]
    IF132_13105
Secretion system [BR:vnv02044]
 Type II secretion system
  General secretion pathway protein
   IF132_13105
SSDB
Motif
Pfam: GspA_C39-like AAA_22 T2SSB AAA_16 PG_binding_1 AAA_19 AAA_30 AAA SLFN-g3_helicase AAA_5 TsaE AAA_14 NACHT AAA_7 PG_binding_3 TniB AAA_11 PIF1 AAA_24 nSTAND3 TrwB_AAD_bind ResIII Helicase_RecD NTPase_1 AAA_25 cobW
Other DBs
NCBI-ProteinID: QOD69704
LinkDB
Position
1:complement(1391066..1393192)
AA seq 708 aa
MYKDFFGFSELPFSIVPNSRYLYLSQRHREAITHLQAGLGDGGGFAMLTGEVGTGKTTVA
KSMLANLGDNKCAALLLNPTFSSLELLEAICDEFNLSYPQQASLKQLHQIIHQFLLRNHQ
IGRQTLLVIDEAQHLAADVLEQLRLLTNLETESSKLLKVLLVGQPELQKLLQTTQLRQLA
QRITGRYHLLPLDERETADYIAFRLHTAGGDKQLFDRSSTKLIAKYSHGIPRLINLICDK
ALQLSFYQSTLLVSKTNVHKACEEVMQFQAQIYQQPQTGRSTTRLAKSAVALSIIALLAS
GGYWYTTQLSTNQAAVASDVEPDAPSSALVIAPAPSENIVDLLMARQDPQQALSELYQVW
GYQASEQDSLCLNAPLSVFRCARLQSNWQEIVQANRPVVLTLQQQNQRGYVVLWRVQHEW
AEVLNGDARLRVPVGELLALWRGETMAIWRAPLRDTLKLNMSGEAITLLDQLLAKALNDD
PLGGEHFDSALQRRVEWFQQWQGINVDGIAGPNTLSRLQQLVQLSAPSLQQGAELDEQEK
LAQRLSYPPFGYLSPLPRTFPQASLVEAKPAPILLAQNASSPELPNADKAQDLLDNLDLS
GFSPELAMKVESALASPSPEPSQTKQGEVHSLEMEAARWRGRLPALDLQSHIYSNDSQRR
WLKINGAEYRQGDWIEQQVKLVEILPQSIVVEFDGEKIAIPALYEWKG
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgtataaggacttttttggcttctctgagttgccattttcgattgtgccgaactcacgt
tatctctatttgagtcaacgtcatcgtgaagccatcacccatctgcaggcaggtttgggc
gatggcggtgggtttgccatgctaactggtgaagtggggacaggcaaaaccaccgtggct
aagtcgatgttggccaacttaggtgacaacaaatgcgccgcgctgctactcaatccgacc
ttctccagcttggaactgctcgaagcaatttgtgatgagttcaatctcagctatccacag
caggcaagcctcaagcaactccatcagatcattcatcagttcttactgcgcaatcaccaa
atcgggaggcaaacactgctggtgattgatgaagcgcagcacctcgcggcggatgttttg
gagcaactacgcttactcaccaacttagaaaccgagagcagtaaactgctcaaagtgttg
ctggtcgggcagcctgagctgcaaaagctgctgcaaaccacccaactgcgtcaactagcc
cagcgcattacgggccgctaccatttgttacccttagatgagcgagagacggccgactac
atcgcttttcgtctgcataccgctggaggtgacaagcaactgtttgatcgcagctcgacc
aagctgattgccaaatacagtcacggtatcccgcgtttgattaacttgatttgcgataaa
gcgctgcaattgagtttttaccaaagtacgctgctggtgtccaaaaccaatgtgcataaa
gcgtgtgaagaggtgatgcagtttcaggcgcaaatctatcagcagcctcaaacaggccgc
tccactacaaggttggcaaaaagtgccgtggcgctgagcatcatcgcgctgctggcaagc
ggtggttactggtacaccacgcagctaagcacaaatcaagccgcagtggctagcgatgtt
gaacccgatgcgccaagcagcgctctcgtgattgcaccagcaccgtcagagaatatcgtc
gacttgctgatggctcggcaagatccacagcaggcgctgagtgagctgtatcaagtgtgg
ggatatcaggcgagtgagcaagacagcttatgtcttaatgcgccactgtcggtatttcgt
tgtgctcgcttgcagagtaattggcaggagatagtacaggctaaccgtccagtggtgtta
acgctacagcagcagaatcagcgtgggtatgtggtgctttggcgcgtgcagcatgagtgg
gcggaggtgctcaatggcgatgcgcgcctgcgagtacccgtcggcgaactgctcgctttg
tggcgcggagaaacgatggctatttggcgtgcgccgctgcgtgacaccttaaagctcaac
atgagcggcgaagcgattacgctattagaccagctactggcgaaagcgctcaatgatgat
ccgctaggcggtgagcactttgatagcgcgctacaacgccgtgtggaatggttccaacaa
tggcaggggataaatgtcgatgggatcgccgggccgaacactttgtcgcgtttgcagcag
ttggttcaattgagcgcgccgagtttgcagcaaggggctgagctagacgagcaagagaag
ctggcgcaacgcttgagttatccgccgttcggttatctatcaccgttacccagaactttt
ccgcaggcgtctctggtagaagccaaacctgcgcctatactgctcgcgcaaaatgcctct
tcacctgagctaccgaacgcggataaggcgcaagacttactcgataacttagatctctca
ggtttttctccagaattggcgatgaaagtggaaagtgcgttggcttcaccatcacctgag
ccaagtcagacaaaacagggggaagtgcattcgctggaaatggaagcggcgcgctggcgc
gggcgtttaccggcgctggatctgcaatcgcatatttactccaatgacagccaacgacgc
tggttgaagatcaatggcgcagagtatcgccaaggggattggattgagcagcaagtcaag
ctggtggaaattttacctcagtcgattgtggtggagtttgacggcgagaagattgccatt
ccggctctgtatgagtggaagggatga

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