Vibrio navarrensis: IF132_13765
Help
Entry
IF132_13765 CDS
T07785
Name
(GenBank) PadR family transcriptional regulator
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vnv
Vibrio navarrensis
Pathway
vnv02024
Quorum sensing
vnv05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IF132_13765
05111 Biofilm formation - Vibrio cholerae
IF132_13765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vnv03000
]
IF132_13765
Transcription factors [BR:
vnv03000
]
Prokaryotic type
Helix-turn-helix
PadR family
IF132_13765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
DUF5340
PycTM
Motif
Other DBs
NCBI-ProteinID:
QOD69818
LinkDB
All DBs
Position
1:1531763..1532302
Genome browser
AA seq
179 aa
AA seq
DB search
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAEQELVTCVLEPQ
EGKPDRKVYSITDAGRSALGDWFDQPTAHPTVRDEFSAKLMACAVQPSAPYRHQLAQLVE
ESRKLVAHYKEIEAAYYATPSTLDKQGRLERLTLRRNLMLRETWINWADEVLAELEVLG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttattctgaccgttttaagcacacgtgatgctaccggttacgac
atcacgaaagaattctcagccagtatcggctacttctggaaagcgagccaccaacaggtt
taccgcgagctcaacaaaatggctgagcaagaactggtgacttgtgtactggaaccacag
gaaggcaaaccggatcgtaaagtttactctattaccgacgcaggacgttcagcgctgggt
gattggtttgatcaaccgaccgcacacccaacggtgcgtgacgaattctctgccaagctg
atggcttgtgcagtgcagccgtctgcgccataccgccatcaattggcgcaattagtcgaa
gagtctcgcaagctggtcgctcactacaaagagattgaagcggcttactacgccacacca
tcgaccctcgacaaacaaggtcgtctagagcgtttgacactgcgccgcaacctgatgcta
cgtgaaacgtggatcaactgggcagacgaagtgttggcggaattggaagtactcggttaa
DBGET
integrated database retrieval system
