KEGG   Vibrio navarrensis: IF132_14605
Entry
IF132_14605       CDS       T07785                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
vnv  Vibrio navarrensis
Pathway
vnv03070  Bacterial secretion system
vnv05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vnv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IF132_14605 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    IF132_14605 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vnv02044]
    IF132_14605 (gspD)
Secretion system [BR:vnv02044]
 Type II secretion system
  General secretion pathway protein
   IF132_14605 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: QOD69969
LinkDB
Position
1:complement(1741022..1743064)
AA seq 680 aa
MKHWFSKSAWLLAGTLACTSGAWASEFSASFKGTDIQEFITIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMENGVLKVVKSKDSKTSAIPVVGDDTVKG
DNVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEIIK
RVDQAGDTEVEVIELKNASASEMVRIVDALNKSQDAKNTPANLLPKLVADERTNSILISG
DPKVRERLKNLIEKLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKNSGQKTA
GSQRNDVVIAAHQGTNSLVLTAPPDIMIALQEVISQLDIRRAQVLIEALIVEMAEGDGIN
LGVQWGSLESGALIQYGNSGAQIGKVMIGLEEAKDVKKTESYWNSSKTNADGSTGGWESR
EYTEKGDYSTLASALSGVNGAAMSLVMGDWTALISAVASNSNSNILSSPSITVMDNGEAS
FIVGEEVPVLTGSSASSNNDNPFQTVERKEVGIKLKVVPQINEGDSVQLNIEQEVSNVLG
ANGAVDVRFAKRQLNTSVIVQDGQMLVLGGLIDERALESESKVPLLGDIPILGHLFKSTS
TQVEKKNLMVFIKPTIIRDGMTADGITQRKYNYIRAEQLYKADQGLKLMGDGNIPVLPKY
GEDKRHPAEIQAFIEQMESN
NT seq 2043 nt   +upstreamnt  +downstreamnt
gtgaaacattggtttagcaaaagcgcatggttgctagcagggacgctagcctgtacgtcc
ggcgcgtgggcaagcgaatttagtgcgagctttaaaggtacggacattcaggaattcatt
acgatcgtcggacgcaatctggagaaaaccatcattgttgatccgtcagtgcgcggcaaa
attgatgtccgcagctatgatgtattgaatgaagagcaatactacagcttctttctcaat
gtgttggaagtgtacggctatgccgtggtggaaatggaaaatggcgtactgaaagtcgtc
aaatcaaaagactcgaaaacctcggccattcctgtggtgggtgacgataccgtcaaaggc
gacaacgtcatcacgcgcgtcgttgcggtgcgcaatgtctcggtgcgcgaactttcgcct
ctgctgcgccaactgatcgacaacgcaggcgcaggtaacgtggtgcactacgacccagcc
aacatcattttgatcaccggccgtgcggcggtggtgaatcgccttgcggaaatcatcaaa
cgtgtcgatcaggcgggcgataccgaagtggaagtgattgaactgaaaaacgcgtctgcc
tctgaaatggtgcgcattgtcgatgcactgaacaaatcccaagacgccaaaaatacccca
gccaatttgctgcctaaattagtggcagacgaacgcactaactccatcttgatctcgggt
gatccgaaagtgcgtgaacgcctgaaaaacctgattgagaagctcgatgtcgagatggca
accaaaggcaacaaccgcgtggtgtatctcaaatacgctaaagcggaagatttggtcgat
gtgctcaaaggagtgtccgataatctgcaagcggagaaaaattccggccaaaaaaccgcg
ggttcgcagcgcaatgacgtggtgatcgccgctcaccaaggtaccaactcgctggtgctg
actgcgccgcccgatatcatgattgcgttgcaagaagtgatttctcagttggatattcgt
cgtgcacaagtattgattgaagctttgattgtcgaaatggcggaaggcgatggcattaac
cttggcgtacagtggggctcactggaaagtggcgctttgattcagtacggcaacagtggt
gcacaaattggcaaggtgatgattggtcttgaagaagccaaagatgttaagaaaacagag
agttattggaattcaagtaaaacaaatgccgatggctcaaccggtggttgggaaagccgc
gagtatactgaaaaaggcgattactccactctagcctctgccttatcaggcgtaaatggc
gcagcgatgagtttggtcatgggtgattggacagccttaatcagcgcggtcgccagcaac
tccaattcgaacatactctcttcgcctagcattaccgtgatggacaacggcgaagcgtcg
tttattgttggggaagaagtgccagtcttaaccggttcatcggccagctcgaacaacgac
aatccattccagacggtggaacgtaaagaggttggtatcaaactgaaagtagtgccgcaa
atcaacgaaggcgactcagtacaactcaatattgagcaagaggtctccaacgtgcttggg
gctaacggcgcggtcgacgtgcgctttgccaaacgccaattgaatacctctgtgattgtt
caagacgggcagatgctggtactcggtggtttgattgacgagcgtgcgctggaaagtgaa
tcgaaagtaccgctattgggggacattccaattttgggccacctgttcaaatcgaccagt
actcaagtcgagaaaaagaacctgatggttttcatcaagccaaccattattcgcgatggc
atgacggctgacggcatcacccagcgcaaatacaactacattcgtgccgaacagttatat
aaagccgatcaaggtttgaagctgatgggcgatggtaacatcccagttctgccaaaatat
ggtgaagataagcgccatcctgctgaaattcaggcctttatcgaacagatggaaagcaac
taa

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