Vibrio navarrensis: IF132_15600
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Entry
IF132_15600 CDS
T07785
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv03420
Nucleotide excision repair
vnv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IF132_15600 (uvrD)
03430 Mismatch repair
IF132_15600 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_15600 (uvrD)
Enzymes [BR:
vnv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IF132_15600 (uvrD)
DNA repair and recombination proteins [BR:
vnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IF132_15600 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IF132_15600 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QOD70140
LinkDB
All DBs
Position
1:1949790..1951964
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AA seq
724 aa
AA seq
DB search
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
QRLLKRLIKAQNLDEKQWPARQVAWWINGKKDEGLRAAHIDAYHDPVTKTYLQLYAAYQE
ACDRAGLVDFAEILLRAHELLREKKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
ECHVMIVGDDDQSIYGWRGAKVENIEKFTLEFPSVNTIRLEQNYRSTKTILDASNALIAN
NTERLGKELWTDGVQGEPISIYSAYNELDEARFAVSKIKEWQDKGGALNDAAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGLG
DKTLETVRFAARDRGCTLWEASIGLIEERVLTGRAATALGRFIELINALEDDSFEMPLHV
QTDHVIKSSGLYSMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEEMSLLTAFLTHAA
LEAGEGQADDFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRF
SQTAVKDNFNETGFSLGSRVRHPKFGEGTIINFEGSGAQGRVQVAFNGEGIKWLVTAYAK
LEKM
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccttcacttttactcgatggcctgaacgacaaacagcgtgaagccgttgcc
gcgccacttgaaaatctactcgtcctcgctggtgctggcagtggcaaaacccgcgttctg
gtgcatcgcatcgcttggttgatgtcggtggagcaagcgtcgccgttttcgatcatgtca
gtcaccttcaccaacaaagcagcggcggaaatgcgtggccgtattgaagagttgatgatg
ggcagcgcctcgggcatgtggaacggtacctttcacggtatttgtcaccgcatcttgcgc
gcccactatctcgatgccaagttgccggaagatttccagatcatcgatagtgacgaccag
cagcgtttgctcaagcgactgatcaaagcgcaaaacttagatgagaagcagtggccagcg
cgtcaggtggcttggtggatcaacggcaagaaagatgaagggctacgtgcagcgcacatc
gatgcctaccatgatccggtgaccaaaacctatttgcagctttatgcggcctatcaggaa
gcgtgcgaccgagcaggtttggtcgactttgcggaaattttgctgcgcgcccacgagcta
ctgcgtgagaaaaaacacattcgcgaacactaccaagcgcgctttaagcacattctggtc
gacgagtttcaagataccaacaacattcaatacgcttggctgcgcatgatggccgggcct
gagtgccatgtgatgatcgtgggtgacgacgatcaatctatctacggttggcgcggggca
aaagtggagaatattgagaaattcacgctcgaattcccaagtgttaacaccatccgcctt
gagcaaaactaccgttcgaccaaaaccattctcgatgcgtcgaatgcactcatcgccaac
aacaccgaacgattgggcaaagagctgtggaccgatggcgtgcaaggtgaacccatctcg
atctattccgcatacaacgagctggacgaagcgcgttttgcggtgagcaaaatcaaagag
tggcaagacaaaggcggcgcgctcaacgatgcggcgatgctttatcgtaataacgcccag
tcgcgggtgctggaagaggcgttgattcaagcgggtctgccatatcgcatttacggcggc
atgcgcttcttcgaacgccaagagatcaaagacgctctgagctacttgcgtttaatcgcc
aatcgtaatgacgacgcagcgtttgagcgggtggtcaacaccccgacccgcggcttgggg
gataaaacgctggaaacggtgcgcttcgcggcgcgtgatcgcggttgtaccctgtgggaa
gcgagtatcggcctgattgaagagcgagtgctcactggtcgcgctgcaaccgctttgggg
cgtttcatcgaactgattaatgccttggaagacgacagctttgagatgccgctgcacgtg
caaactgaccatgtgatcaaatcgtcgggcctgtacagcatgtatgagcaggaaaaaggc
gaaaaatccaaagcgcgtattgagaacttggaagagttggtgaccgcgacgcgtcagttt
gaaaagccggaagaggcggaagagatgagtctgctgaccgcctttcttacccatgcagcg
ctggaagcgggtgaaggccaagcggacgattttgaagacgcggtacaactgatgaccctg
cacagcgccaaaggattggagttcccgctggtgtttatggtcggggtggaagagggcatg
ttccccagtcaaatgtcggctgaagaagctgggcgtttggaagaagaacgtcgtttgtgc
tacgtcggtatgacgcgtgcaatgcaaaaactctacatcacctacgccgaaatgcgccgc
ttatacggccaagataagtatcacaaaccgtcacgctttattcgtgagctaccggaaact
tgtttggacgaagtgcgcatgaaagcgcaagtgagccgtccggccagcagtggccgtttt
agccaaacggcggtgaaggacaacttcaacgaaaccggattctcactcggctcgcgcgtg
cgtcatcctaagtttggcgaaggcaccatcatcaactttgaaggcagtggcgcgcaaggc
cgagtgcaagttgcctttaatggtgaagggatcaagtggttagtgaccgcttacgcgaaa
ctggaaaaaatgtga
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