Vibrio navarrensis: IF132_15880
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Entry
IF132_15880 CDS
T07785
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vnv03021
]
IF132_15880 (rpoH)
Transcription machinery [BR:
vnv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IF132_15880 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_10
HTH_25
UCR_14kD
HTH_26
KORA
Motif
Other DBs
NCBI-ProteinID:
QOD70185
LinkDB
All DBs
Position
1:2006750..2007607
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AA seq
285 aa
AA seq
DB search
MTNQAYPMALVTQDSLDGYIRSVNSYPMLSADEERELAERLHYKGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVARELGVEPSEVREMESRLAAVDS
TFDLTVDDEDSGSVSTAPVLYLEDKSSDIADNLEAQNWEEHTNNRLSLALASLDERSQHI
VRSRWLDDDKATLQDLAERYGVSAERIRQLEKNAMKKLKMAVGEI
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcaagcgtatccgatggctctagtaacgcaagatagccttgatggctatatt
cgttcggtaaacagctatcccatgctgagtgcggacgaagagcgtgaactcgcagagcgt
ttgcattacaaaggcgagattgaagcagcgaaagggctgattctgtctcatctgagattc
gttgttcacgtggcccgtggctattccggttacggtttaccgatggctgacttagttcaa
gaaggtaatatcggcttgatgaaagcggttaaacgcttcaacccagaagtcggtgtgaga
ctggtgtcgtttgcggtgcactggatcaaagcggagatccacgagtacgtactgcgtaac
tggcgcatcgtcaagattgccaccaccaaagcacaacgtaagctgttttttaatctgcgc
aaatccaaaaaacgcttaggctggttcaacaacggtgaagtggaaaccgttgcccgcgaa
ttgggtgtggagccttctgaagtgcgtgaaatggaatctcgtcttgctgcggtcgattcg
acattcgatctcacggttgatgatgaagattccggcagtgtatcgacagcgccagtgctt
tatttagaagataaatcctctgatattgcggataaccttgaagcgcaaaactgggaagag
cacaccaacaatcgcctctctttggcgctagcgagtttggatgaacgcagtcagcatatt
gtgcgttctcgttggttggacgacgacaaagcgacgttgcaagatctggctgaacgttat
ggtgtttctgccgagcgtattcgtcagctagagaaaaatgccatgaagaaactgaaaatg
gcggttggtgaaatctaa
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