Vibrio navarrensis: IF132_15975
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Entry
IF132_15975 CDS
T07785
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnv03016
]
IF132_15975 (trmA)
Enzymes [BR:
vnv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
IF132_15975 (trmA)
Transfer RNA biogenesis [BR:
vnv03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
IF132_15975 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Methyltransf_31
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
PrmA
Methyltransf_15
Methyltransf_12
DREV
DUF6579
MethyltransfD12
RP9_C
Motif
Other DBs
NCBI-ProteinID:
QOD70203
LinkDB
All DBs
Position
1:complement(2030789..2031898)
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AA seq
369 aa
AA seq
DB search
MATLDVNPQRYQAQLAEKVQRLTDMFAPYQAPELEVFESPEQHYRMRAEFRVWHEGDEMY
YIMFNQETREKYRVDQFPAASRLINDLMPLLIEAMQGNESLRRKLFQVDFLSTLSGEILV
SLLYHRQLDDAWIENAKTLKQRLNDEGFNLNLIGRARKMKIVLDRDYVIEKLDVNGKPYI
YQQVENSFTQPNGKVAEKMLAWAVDCTQESQGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVESAQYNIAANKIENVQIIRMSAEEFTEAMEGKREFRRLKDAGVDLKSYNCNTIFV
DPPRAGMDVDTCKMVQGYERILYISCNPDTLLENLEILSETHTITRFALFDQFPYTHHME
AGVMLERIK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgatgtaaacccacagcgctaccaagctcagttggcagaaaaagtgcaa
cgtttaaccgatatgttcgcaccttaccaagctccagagctggaagtgtttgagtcccct
gagcagcattaccgcatgcgcgcagagtttcgtgtgtggcacgaaggggacgagatgtat
tacatcatgttcaatcaagagacacgcgaaaaataccgtgtggaccagttccccgccgcc
agtcgcctgatcaacgatttaatgccactgcttatcgaagccatgcaaggcaatgaatca
ctgcgccgtaaactgttccaagtcgacttcctctccacattgagcggcgagattctcgtt
tcgctgctttaccatcgtcaattggacgacgcttggatcgaaaacgccaaaacgctgaaa
caacgcctaaacgacgaagggtttaacctcaatctgattggccgtgcgcgtaaaatgaaa
attgtcctcgaccgcgactacgtgatcgagaagctggatgtaaacggcaagccttatatc
taccaacaagtggaaaacagtttcacgcagccaaacggcaaagtcgcggaaaaaatgctg
gcatgggcggttgactgcacccaagagagccaaggcgatttgctggaactttactgcggc
aacggcaatttctccctagcgctggcgcaaaactttgaacgcgtgctggctacagagctg
gcaaaaccatcggtggaatcggcgcaatacaacattgccgccaacaaaattgagaacgta
cagatcatccgtatgtcagcggaagagtttaccgaagcgatggaaggcaaacgcgagttt
cgccgccttaaagatgcgggcgtagatttgaagagctacaactgcaatacgatttttgtc
gaccctccacgcgcaggtatggatgtagacacctgtaaaatggtgcaaggctatgagcgc
attttgtacatctcctgcaacccagataccctgctcgagaacctcgaaatcctgagcgaa
acccacaccattacccgtttcgctctgtttgaccagttcccttacacccatcacatggaa
gcgggtgtgatgttagagcgcattaaataa
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