Vibrio navarrensis: IF132_17240
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Entry
IF132_17240 CDS
T07785
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
vnv
Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnv03019
]
IF132_17240 (rapZ)
Messenger RNA biogenesis [BR:
vnv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IF132_17240 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
SKI
sCache_like
AAA_17
AAA_22
AAA_16
AAA_33
YGR210-like_G4
Spectrin_Anc-1
DUF6775
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QOD70406
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All DBs
Position
1:complement(2271838..2272701)
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AA seq
287 aa
AA seq
DB search
MRLIIVSGHSGAGKSVALRVLEDLGYYCVDNLPVNLLDAFVQSIAESKQNVAVSIDIRNI
PKRMKELSETLKKLKESLDVSVVFLDADKETLLKRYSETRRIHPLSKGEHTHTLDQAIDQ
EKKILKPLREIADILLDSSNQSLHELSETIRTRVEGHERKELIMVFESFGFKYGLPTDAD
YVFDVRFLPNPHWEPSLRPMTGLDGPIKAFLERHEEVLELKHQIESFIEHWLPMLEKNNR
SYLTVAIGCTGGKHRSVYLTQQIGEYFAELGHKVRIRHTGLEKRNKE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcatcatcgtcagtggacactccggagccggcaaaagcgttgctttgcgcgtt
ctggaagatctcggttactactgtgtcgataacctgccagtcaatctgcttgacgcgttt
gttcagtccatcgccgaaagcaagcaaaatgtcgcggtcagtatcgatattcgcaacatt
cccaaacgcatgaaggagctttccgagaccttaaagaagctcaaagagagccttgatgtt
tcggtggtttttctcgatgccgataaagagaccttgctcaagcgctacagtgaaactcgc
cgcatccatccactttctaagggtgaacatacccacacgctcgatcaagcgattgatcaa
gagaagaagatcctcaaaccattgcgagagattgccgatatcctgctcgacagcagcaat
caatcactgcatgaactgagtgaaaccattcgcacccgagtcgaaggccatgaacggaaa
gaactgatcatggtgtttgaatccttcggctttaaatatggcctgccaaccgacgcagac
tatgtgtttgatgtgcgcttcctaccaaacccgcattgggaaccatcgctgcgacccatg
accggtctggatggcccgatcaaagcctttttggagcgccacgaagaagtattagaactc
aagcatcaaatagaaagctttatcgaacattggctaccgatgctggaaaagaacaatcgc
agctacctcactgtggcgattggctgtaccggcggaaaacatcgctccgtgtacttaact
cagcaaattggtgaatattttgccgagcttgggcacaaagtgcgaattcgtcacactgga
ttagaaaagcgcaacaaggaatag
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