Vibrio navarrensis: IF132_17355
Help
Entry
IF132_17355 CDS
T07785
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
vnv
Vibrio navarrensis
Pathway
vnv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IF132_17355 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_17355 (uvrA)
DNA repair and recombination proteins [BR:
vnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IF132_17355 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IF132_17355 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
nSTAND3
AAA_21
AAA_23
DnaJ_CXXCXGXG
NACHT
AAA_25
ScfRs
MMR_HSR1
Viral_helicase1
UPF0547
Motif
Other DBs
NCBI-ProteinID:
QOD70429
LinkDB
All DBs
Position
1:complement(2295338..2298160)
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLTIPRDKLIVITGSSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRC
PEHKVPLAAQTVSQMVDKVLEMPEGSKMMLLAPIVKERKGEHVKTLENLAAQGFIRARID
GETCDLSDPPTLELHKKHTIEVIVDRFKVRADLQQRLAESFETALELSGGIVVVAPMEGE
GEEIVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPDRVIQDANLS
LAQGAIRGWDQKNYYYYQMLTSLADHYGFDLHVPFNTLSKKIQEIILKGSGRAEVEFKYI
NDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELVKYISTKPCASCGGTRLRLEARNV
FINDTTLPQIVELSIAEALAFFANLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLNHLRDLGNTV
LVVEHDEDAIRMADYVIDIGPGAGVHGGQIVAEGSVDEIIANPDSLTGQYLSGVKEIAVP
RERTPYDASKTVELIGASGNNLKNVNLSVPVGLFSCITGVSGSGKSTLINDTFFKIAHTA
LNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYK
GKSIDEVLEMTVEDAREFFEPVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVIKTADWI
IDLGPEGGQGGGEIIAQGTPEDVALVEGSHTARFLKPMLN
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatagaagttcgcggagcacgtactcataacctaaaaaatatcaatctcacc
attccccgagacaaactgatcgtcattacgggctcatccggctcaggtaagtcgtcacta
gccttcgatactctctacgccgaagggcaacggcgctatgtggaatcgctctcggcttac
gcgcgccagttcttatctctgatggaaaagccggatgtggaccacatcgaagggctttcg
ccagcgatctccatcgagcagaaatctacctcacataacccgcgttctaccgtcggtacc
attaccgaagtgtatgattacctgcgtctgttgtacgcccgagtcggcgaaccgcgctgc
cctgagcacaaagtgccgctggcagcgcaaaccgtgagccaaatggtcgacaaggtgctg
gagatgcccgagggcagcaaaatgatgttgctggcgccgatcgtaaaagagcgcaaaggc
gaacacgttaaaacgctggaaaacctcgccgcgcaaggctttattcgtgctcgtatcgat
ggcgagacgtgcgacctgtccgatccaccgacactcgaattacacaaaaaacacaccatt
gaagtgatcgtcgatcgctttaaagtgcgcgccgatctgcagcaacgtctggcagaatcg
tttgaaacggcacttgagctctccggcggtattgtggttgtggctcccatggaaggtgaa
ggcgaagagatcgtcttttcggccaactttgcctgtccgcactgtggttacagcatgcaa
gagctagagcctcgcctgttctcttttaacaacccggctggcgcctgtggcacttgtgac
ggtttgggcgtgcagcaatattttgatccggaccgagtgatccaagatgccaatctcagt
ctggcacaaggcgcgattcgcggctgggatcaaaaaaactattactactatcagatgctc
acttcgctggccgatcattatggttttgatctgcatgtgccattcaacactttgtcgaaa
aagatccaagagatcattctcaaaggttcgggccgtgctgaagtggagttcaaatacatc
aatgatcgcggtgatattcgcgttaaacgtcatccgtttgaaggtattctcaacactcta
gaaagacgctaccgcgataccgaatccaactcggtgcgcgaagagttggtcaaatacatt
tcgaccaagccatgtgccagttgtggcggtactcgcttgcgtttagaagcgcgcaacgtg
ttcatcaatgacaccaccctgccgcagattgtcgaactcagcatcgccgaggcattggcg
ttttttgccaatctcaagctcgaagggcaacgcgcgcagatcgcggaaaaagtgatgaag
gagatcaacgaccgcttgcagtttttggtcaatgtcggcctcaattatctcaacctgtcg
cgtagtgcagaaaccctctccggcggtgaggcgcagcgcatccgcttggcaagccaaatt
ggcgcaggtctggtgggggtgatgtacgtgctcgatgagccctccatcggtctacatcag
cgcgacaacgagcggctgctgaaaacgctcaatcatctgcgcgacttaggtaacaccgtc
ttagtggttgagcacgatgaggatgcgatccgcatggccgattacgtgattgacatcggc
ccgggtgccggggtgcacggcgggcagatcgtcgccgagggcagcgttgacgagatcatc
gccaatccggattcactcacaggtcaatacctgagcggcgtgaaagagattgccgtacca
cgtgagcgcaccccgtacgatgcgagcaaaaccgtcgagttgatcggcgcgagtggcaac
aacctgaaaaacgtcaacctctcggtgcccgtgggtttgtttagctgcatcaccggcgta
tccggttctggcaaatcaacactgatcaacgacaccttctttaaaatcgcccacaccgcg
ctcaatggcgccaccaccgcccaacccgcgccgtacaaaagcatcaaagggctggagcat
tttgataaggtgattgatatcgaccagagtccgattggtcgcacgccgcgctcgaacccg
gccacctatacgggcatttttaccccaatccgcgagctgttttcgggcacgcaagagtct
cgttcacggggttacaagcctgggcgctttagtttcaacgtacgtggcggtcgctgtgaa
gcctgtcagggcgatggcgtgatcaaagtcgagatgcactttttacccgatgtgtacgtg
ccgtgtgatgtgtgtaaaggcaagcgttataaccgcgaaacactggaagtgcgctataaa
ggcaaatcgattgacgaagtgctggaaatgacggtcgaagacgcacgcgagttctttgaa
cccgttccggtgattgcgcgtaaattgcaaaccttgatggatgtcggcctctcctacatt
cgccttggtcaagcggcgaccacgctctccggcggtgaagcgcagcgggtgaaactggcg
cgtgaattgtccaaacgcgacacaggtaagaccttgtatattttggatgaaccgaccacg
ggtctgcattttcacgatatccaacaactgcttacagttttgcatcgcctgcgtgatcac
ggcaatacggtggtggtgattgagcacaacttggatgtgattaaaaccgctgactggatc
atcgaccttggtcctgagggcgggcaaggcggcggcgagatcattgcccaaggcacacca
gaagatgtggccttggtcgaaggttcacacactgcgcgcttccttaagcctatgttgaac
tag
DBGET
integrated database retrieval system
