Vibrio navarrensis: IF132_17430
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Entry
IF132_17430 CDS
T07785
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IF132_17430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_17430
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IF132_17430
DNA repair and recombination proteins [BR:
vnv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IF132_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
AAA_11
Herpes_Helicase
AAA_22
TraI_hel_assoc_N
DUF4926
SH3_13
AAA_16
nSTAND3
SLFN-g3_helicase
Helicase_RecD
PIF1
RsgA_GTPase
ABC_tran
AAA_28
AAA_18
T2SSE
AAA_23
UvrD-helicase
AAA_29
NTPase_1
NACHT
SMC_N
Motif
Other DBs
NCBI-ProteinID:
QOD70439
LinkDB
All DBs
Position
1:2311056..2313362
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AA seq
768 aa
AA seq
DB search
MRNTEPKHHQEWKEFEGLLRIVRVENKDAGWFQATCTLIDDTGEILDRDGLYYLDASHQW
MEHFVEVGQIWMIEQGMMWSRLLTTQDGYARTSYTIEPKVVSICRPSGKSLMWHFTNCQW
YPGIGEKKAESLISTLSDASGYQSLYEALDNRLVERLVSAPLITQWDAEVLIKGWERQSS
KQVLKWLEDKQIEPSLACKVFAFHGKNAVDAIEADPYCLTSFNMPWREVDKLAQLKFGIA
RDDERRLQAAVTEVLWGAFNDHGHTKVELPYFLHNMKCYIGDDLEKWVTAYIGMIEQSRG
IVRGNYIHAFEPAVMEMMVANRIADLVCIDYQSPLSIGAILSVIRDFEHKQGFKLTKEQK
EAVSRTVSTPFSIITGGAGVGKTTVLKALYALYDAAGFKRVQLALSGRAVQRMSEATGEH
ATTIAGHLYHFNWDKVNKDVLKKMVVVVDEASMVDLHTMYRLVDNVPSEVHLVLIGDPFQ
LPPIGGGLVLHELVDRPYLPVSHLTEVKRTAIDSSIPLVSGDVRKGRVPSYLGNNVEFHK
VDSDQIVDRAINEYMRDIESSQILCSTNTMVGRVNIKAQKQLNPNGVVLPYIVEGQRYDS
EVRLNDPVICVANLYHQEYDLRNGSMGRIVEVYDEPRTFEVKHSNRSKQSRLMTSYGRAR
WDNDSGAGFDTELPLEVIEKLRLAYAITVHKAQGSQFKRVIFAAIDGRNLDRTLVYTAIT
RASQHVVVMGDIDAVREAIMRPPSATHRLVGLGGFLDEVVGGISFIAS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacactgaacctaagcatcatcaagagtggaaagaattcgaaggactgttgcgt
atcgtccgagtcgagaacaaggacgcaggctggtttcaggcaacttgtacactgattgac
gatacaggagaaattttggatcgtgatggactttattatcttgatgcatcacatcagtgg
atggaacatttcgttgaggtagggcagatatggatgattgagcagggaatgatgtggtcg
aggctccttacaactcaggatggatatgccagaacctcctatacaattgaacctaaagtt
gtgagtatctgccgtccaagcggtaagagtttgatgtggcattttactaactgccaatgg
tatccaggcattggtgagaaaaaggctgaatcactaattagtactctaagtgatgcttca
gggtatcaatctctctatgaggcgttggataatcgtttggtcgaaaggttagtaagtgct
ccgttgattacacaatgggatgcagaggtcttaataaaggggtgggagcggcaaagtagt
aagcaggttttaaagtggttagaagataaacaaatcgagcctagtctggcatgcaaagtt
tttgctttccatggcaagaacgcagttgatgccattgaagccgatccttattgtctgaca
tcgttcaatatgccatggcgtgaggtagataaactagcacagctaaagttcgggattgct
cgcgatgacgagcgtcgcctacaagctgctgtgacggaggtcttgtggggagcatttaac
gatcacggacacacaaaagtagaattaccttactttctacataatatgaagtgttatatc
ggtgacgacttagagaaatgggttactgcgtatattggaatgattgagcaatctagaggg
atagttcgcggtaattatatccatgcctttgagcctgctgtgatggagatgatggtcgct
aatcgaattgctgatctagtatgtatcgactatcaatcaccactatcgattggagccatc
ttatcagtgattcgagatttcgagcacaaacaaggtttcaagcttaccaaagagcaaaaa
gaagcggtttcgagaacagtttctactcctttttccatcatcactgggggagctggcgtc
gggaaaaccacagtgttaaaagctctatatgcactttacgatgctgctggttttaagcgt
gtacagctagcgttgtctggacgtgcagtgcaacgtatgagtgaagcaacaggagagcat
gcaacgaccattgcgggacatttatatcacttcaactgggataaggttaataaagacgtt
ctgaaaaagatggttgttgtggttgatgaggcatcaatggttgatctgcatactatgtat
cgtttggtggataatgtcccatcggaagtgcatctagtattgattggtgatccattccaa
cttccacctataggaggtggcttggtcttacacgaactggttgatcgtccttatttgcca
gtatctcatttgacagaggtaaaacgaacagcaattgatagctcaattccattagtttca
ggagacgtgcgaaaggggcgggtgcctagttatctgggaaacaatgttgagtttcacaag
gtggactcggatcagattgtagatagggctattaacgaatatatgagagacatcgagtca
tcccaaattctctgttccaccaatacaatggtgggcagagtgaatatcaaagcgcagaag
cagttgaatcccaatggagtggtcttgccttatatcgttgaaggtcagaggtatgactca
gaagttcgtctcaatgaccctgtaatttgtgtagccaatctctatcatcaggaatacgac
ttacgcaatggttctatggggcgcattgtcgaggtgtacgacgagccgagaacctttgag
gttaaacactcaaatcgttctaaacagtcgaggctgatgacatcttatggacgtgctcgg
tgggataatgattcaggtgcaggttttgataccgaattgccgctggaagtcattgagaag
ctgcgcctcgcttatgccattactgtacataaagcgcagggttcacagttcaaacgagtt
atttttgctgctattgatggtcgtaaccttgatcgaactctggtgtataccgcaatcacc
cgagcgagtcagcacgttgtagtcatgggtgatattgacgcagttagggaagctattatg
aggccaccgagtgcgactcataggcttgttggacttggagggtttttggatgaggttgtg
ggaggaataagtttcatcgcaagttaa
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