KEGG   Vibrio navarrensis: IF132_18075
Entry
IF132_18075       CDS       T07785                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
vnv  Vibrio navarrensis
Pathway
vnv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vnv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    IF132_18075 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vnv03019]
    IF132_18075 (rnc)
   03009 Ribosome biogenesis [BR:vnv03009]
    IF132_18075 (rnc)
   03036 Chromosome and associated proteins [BR:vnv03036]
    IF132_18075 (rnc)
Enzymes [BR:vnv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     IF132_18075 (rnc)
Messenger RNA biogenesis [BR:vnv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IF132_18075 (rnc)
Ribosome biogenesis [BR:vnv03009]
 Eukaryotic type
  90S particles
   RNase
    IF132_18075 (rnc)
 Prokaryotic type
  rRNA processing factors
   IF132_18075 (rnc)
Chromosome and associated proteins [BR:vnv03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     IF132_18075 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: QOD70541
LinkDB
Position
1:2441173..2441850
AA seq 225 aa
MNSPIDQLSKKLGYQFNDAELINLALTHRSANGKHNERLEFLGDSILSFVIADELYHRFP
KVNEGDMSRMRATLVRGNTLAELGREFGLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDLEVVRGIVLSWYNTRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVECDVAGMDKPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaattctcctattgatcaactaagtaagaagctcggctatcaatttaacgatgctgag
ctgatcaatctggcgctgactcaccgcagcgccaatggtaaacacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcatcgctgatgaactctatcaccgctttccc
aaagtgaatgaaggggatatgagccgcatgcgtgcaactttagtgcgcggaaacacattg
gcagagctgggccgtgagtttggtctgggagattacttaaaattaggtccaggtgagttg
aagagtggcggttttcgtcgcgactcgattctggctgatgcggtcgaagccattattggt
gccatttatctagatagcgatctggaagtggtacgtggcatcgtcttaagctggtacaac
actcgcctggaagccatcaagcctggcgtatctcagaaagacccaaaaacacgcttgcag
gagtttttacaaggcagaagaaaaccgctgccggtctacacagtgactaatattaaaggt
gaagcacacaaccaagaattcacggttgagtgtgatgtcgcgggtatggacaagcctgtg
atcggaaaaggtaccagccgccgcaaggcagaacaagcggctgctgaaacggctctggag
cagttaaccaatggctga

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