KEGG   Vibrio navarrensis: IF132_18385
Entry
IF132_18385       CDS       T07785                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
vnv  Vibrio navarrensis
Pathway
vnv00010  Glycolysis / Gluconeogenesis
vnv00020  Citrate cycle (TCA cycle)
vnv00260  Glycine, serine and threonine metabolism
vnv00280  Valine, leucine and isoleucine degradation
vnv00310  Lysine degradation
vnv00380  Tryptophan metabolism
vnv00620  Pyruvate metabolism
vnv00630  Glyoxylate and dicarboxylate metabolism
vnv00640  Propanoate metabolism
vnv00670  One carbon pool by folate
vnv00785  Lipoic acid metabolism
vnv01100  Metabolic pathways
vnv01110  Biosynthesis of secondary metabolites
vnv01120  Microbial metabolism in diverse environments
vnv01200  Carbon metabolism
vnv01210  2-Oxocarboxylic acid metabolism
vnv01240  Biosynthesis of cofactors
Module
vnv_M00009  Citrate cycle (TCA cycle, Krebs cycle)
vnv_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vnv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
vnv_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vnv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    IF132_18385 (lpdA)
   00020 Citrate cycle (TCA cycle)
    IF132_18385 (lpdA)
   00620 Pyruvate metabolism
    IF132_18385 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    IF132_18385 (lpdA)
   00640 Propanoate metabolism
    IF132_18385 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    IF132_18385 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    IF132_18385 (lpdA)
   00310 Lysine degradation
    IF132_18385 (lpdA)
   00380 Tryptophan metabolism
    IF132_18385 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    IF132_18385 (lpdA)
   00670 One carbon pool by folate
    IF132_18385 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vnv04147]
    IF132_18385 (lpdA)
Enzymes [BR:vnv01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     IF132_18385 (lpdA)
Exosome [BR:vnv04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   IF132_18385 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA HI0933_like FAD_binding_2 NAD_binding_8 Thi4 FAD_binding_3 AlaDh_PNT_C DAO Lycopene_cycl
Other DBs
NCBI-ProteinID: QOD70589
LinkDB
Position
1:2503643..2505070
AA seq 475 aa
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLIERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPQTDIDKIRLWKEKVINQLTGGLGGMAKMRKVNVVNGFGKFT
GPNTIEVEGEDGKTVVNFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVYTKRISKKFNLMLETKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGKLLDAEKAGLEVDERGFINVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGTITDLPNAKAKKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaaagaaattaaagcccaagtagtagtgcttggtgccggtcctgctggttactcc
gctgcattccgctgtgcagacttaggtctggacactgttcttatcgaacgttacaacact
cttggtggtgtgtgtctgaacgtgggttgtatcccatcgaaagcactactgcacgtagct
aaagttatcgaagaagctaaagcgctggctgagcacggcatcgtatttggcgaaccgcaa
acagacatcgacaagatccgtctgtggaaagaaaaagtaattaatcaactgactggcggt
cttggcggtatggctaagatgcgtaaagtgaacgtggttaacggttttggtaagttcact
ggccctaacacgattgaagtggaaggcgaagacggtaaaaccgtggttaacttcgacaat
gccatcgttgcagcgggttctcgcccaatcaaactgccatttattcctcatgaagaccca
cgcatttgggactcaaccgacgcacttgagctgaaagaagtcccaggaaaactgctgatc
atgggcggtggtatcatcggtctggagatgggtactgtgtaccacgctctgggttctcaa
atcgatgtggttgaaatgttcgaccaagttatcccagctgcagataaagacatcgttaaa
gtctacaccaagcgtatcagcaagaaattcaacctgatgctggaaaccaaagtaacagcc
gttgaagcgaaagaagacggtatctacgtttcaatggaaggcaaaaaagccccagcggaa
gctgaacgttacgacgcggttctagtcgctatcggccgtgtaccaaacggtaaactgctg
gatgctgaaaaagcaggcttggaagtggatgagcgtggctttatcaacgttgacaagcaa
atgcgcactaacgttccgcacattttcgccatcggtgacattgtgggtcaaccaatgttg
gcgcacaaaggtgtgcatgaaggccacgttgcggcagaagtgatttctggtaagaaacac
tacttcgatcctaaagtgattccttcaattgcttacactgagccagaagtggcatgggtt
ggtaagacagagaaagaagcgaaagcagaaggtattaactacgaagtagccaccttcccg
tgggctgcctcaggccgagcaatcgcctctgactgtgctgatggtatgactaagctgatc
tttgataaagagactcaccgcgttatcggtggtgctatcgtgggtactaacggtggcgaa
ctactgggcgaaatcggccttgctatcgagatgggctgtgatgcagaagacatcgctctg
accatccacgctcacccaactctgcacgagtctgtgggtctggctgctgaagtgtttgaa
ggcactatcactgacctgccaaatgccaaagcgaaaaagaaaaagtaa

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