Vibrio navarrensis: IF132_18780
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Entry
IF132_18780 CDS
T07785
Name
(GenBank) EAL domain-containing protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IF132_18780
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IF132_18780
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS_9
PAS
Motif
Other DBs
NCBI-ProteinID:
QOD70663
LinkDB
All DBs
Position
1:complement(2600536..2602575)
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AA seq
679 aa
AA seq
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MPSKQLHHWFKTLTANSPFFFAILDRQHGYCMVNERYCDIAGLSEQELIGMNDAKILGEN
FYQKLRPYYQRAFDGEFIEAEVTLDETDLETSLHFSLSPLRDENGIQHIVFHSIDTSEKQ
ILIKSLEESESKFSQLTQLLPDGLLLVEDDSVLFANPAAARLLGFNSPHDLLGEELSRLF
IDEKTKMVFRHKLSTLLSSKAFVCMTSARCGFERRVQLHADNTTVLGNQSQLILIQDADE
TPKQLSNQGDDDIHIDSLTKLYNRFGFTKRLEQLIKNQTPLLLLYLDIDNFKNINDSLGH
HIGDRVILEVSARLKRLLPQHAVIGHLGGDEFGVILPEPENNRMAELLSDRIIALINQPF
DLHHFSKRLACSIGSVRYPEDGQDARVLLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPAAFIPVAEK
AGLIEHLGRVVMREVFNTVKRWKLQGILPGRVAINLSPEQFGNPQLIDFMEKLLRTTELD
PGCITFELTESAVMSDSEHTLQMLNSIKKLGFSLSIDDFGTGYSSLAYLARFPIDELKID
RAFINDIDVLPKQVTVIENIINLGKSLDLTVVAEGVETHQQAALLSNLRCHSIQGFHFYR
PQPKHEIEELFAQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaagcaattacatcattggtttaagacacttacagccaacagcccattcttc
tttgctatcctcgatcgtcagcatggctactgcatggtcaatgaacgctattgcgatatc
gcgggactctctgagcaagagttgatcggcatgaatgatgcgaaaattctcggcgaaaat
ttctaccaaaaactacgcccctactatcaacgtgcgtttgacggtgaatttatagaggcg
gaagtgacgctggatgaaaccgatctggaaaccagcttgcatttcagcctatcgccactg
cgcgacgaaaatggcatacaacacatcgtttttcattccatcgacacctcagaaaaacag
attttaatcaagtcgctcgaagaatcagaaagtaagttctcacagttgacgcaactgcta
ccagacggtttgctgctggttgaggatgattcggttttatttgccaatccagctgctgct
cggctgctgggttttaactcccctcatgacttgctcggggaagagctgagccgcttgttc
atcgatgaaaagaccaaaatggtctttcgccacaagctttcaacgctgctttccagcaaa
gcgtttgtctgtatgaccagtgcacgttgcggtttcgagcgccgcgttcagttgcatgcc
gacaacaccacggtattgggcaaccagtcacaactcattttgattcaagatgcggatgaa
acgcccaaacagctttctaatcaaggcgatgacgatattcatatcgactctctgactaag
ctgtataaccgctttggctttaccaaacgactggaacagctaataaaaaaccaaacgccg
ctgctgcttttgtatttggacatcgacaacttcaaaaacatcaacgactcgctaggccac
catattggcgatcgtgtgattttggaggtctctgcgcgcttaaaacgccttttaccacag
catgccgtgattggccatttaggtggagatgagtttggtgtcattttgcccgaaccggaa
aacaaccgcatggcagagctgttgtcagatagaatcatcgctttgatcaatcaacctttt
gatctgcaccatttcagcaaacgccttgcctgctcgattggcagcgtacgctacccagaa
gatgggcaagacgctcgtgtcctgctgcaaaatgccgatactgcgatgtacgaagccaaa
gatcgcggccgcaatcgtctgatcaaatttaatgatcagatgaacaaagaagcgcgcatg
cgcttatggctggagatcgaactgcaaaaagcgctgcaacaaaatggcttggaagtgtgg
tatcaacccaaagtgaatgcgcgtgacttcagcattaatggcgctgaagccttagtgcgc
tggaaacacccggtcgaaggttacatcagcccagccgcgttcattccggtcgccgaaaaa
gcgggccttattgagcacttaggccgcgtggtaatgcgtgaagtgtttaacacggttaaa
cgctggaagctgcaaggtattttgcccggtcgggtggcaatcaacctctctcccgagcag
ttcggtaatccacaattgattgattttatggaaaagctgctcagaaccacagagctcgat
cctggctgcatcacctttgaactgaccgagagcgcggtaatgagcgacagcgagcatacg
ctgcaaatgctcaactccatcaaaaaattaggcttttcattatcgatagatgattttggt
accggctattcatccctagcctacctcgctcgctttccgattgatgaactgaaaattgac
cgtgcgtttatcaacgacattgacgtgttacccaaacaagtcacggtgatcgaaaacatc
atcaatctcggcaaatcgctggatctcactgtggtggcagaaggggtggaaacccatcaa
caagccgctttgctttctaatttacgttgtcactctatccaaggctttcacttctatcgc
cctcagcctaagcatgaaatcgaagagttattcgcacaaaaccgtcgccacaaaaactaa
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