KEGG   Vibrio navarrensis: IF132_18865
Entry
IF132_18865       CDS       T07785                                 
Symbol
radA
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
vnv  Vibrio navarrensis
Brite
KEGG Orthology (KO) [BR:vnv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vnv03400]
    IF132_18865 (radA)
DNA repair and recombination proteins [BR:vnv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     IF132_18865 (radA)
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI DnaB_C Lon_C DUF7125 GvpD_P-loop Rad51 SLFN-g3_helicase AAA RecA_N AAA_22 nSTAND_NTPase5 AAA_14 AAA_16 ABC_tran Zeta_toxin zinc_ribbon_6 Zn_ribbon_8 AAA_29 NTPase_1 Zn_ribbon_Thio2 cobW Viral_helicase1 AAA_24 nSTAND3
Other DBs
NCBI-ProteinID: QOD70679
LinkDB
Position
1:2620421..2621800
AA seq 459 aa
MVKAKRAYVCNDCGADFPRWQGQCNACGSWNTITEVRLAASPSVARNERLSGYAGSATES
KVQTLSDIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGSPGAGKSTLLLQTMCALSA
HMPALYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQIAEEVRPRIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLREVSNPSAIFLSRGEEATSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVSETSADLALIMALLSSFRDRPLPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPMANMPKGGIVGMQIHGVKKLADAISAFDEL
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggtgaaagcaaaacgcgcgtatgtatgtaacgactgtggggcagattttcctcgctgg
caggggcaatgcaacgcctgtggctcttggaataccattactgaagtgaggctagccgct
tcgccgagtgtcgctcgtaatgagcgtttgtcaggctatgcgggcagtgcaaccgagtcc
aaagtacagaccttgtctgatatcgatttacaggaagtgccgcgttttaccagtggcttt
aaagagctggatcgcgtattgggtgggggcatcgtgcccggtgcggcgattttgattggc
ggaagccctggcgcgggtaaatcgacgctgttgttgcaaacgatgtgcgcgctctcggca
cacatgcctgctttgtacgtcactggcgaagagtctttgcaacaagtcgcgatgcgcgct
tctcgtttgggattgccgaaagagcatttgaaaatgctctcagagactaacgtggataag
atttgccaaattgccgaagaggtgcgaccacgcatcatggtaattgactcgattcaggtg
atgcatgtttcggatgtgcaatcttcacccggaagcgtcgcgcaagtacgtgaatccgcc
acggcattaacccgttacgccaaacaaaataatgtcgctgtctttattgttggccacgta
actaaagacggcaccttagcgggcccgaaagtgttagagcacattattgactgttctgtg
ctgctcgatggcgataccgatagtcgctttcgtaccctgcgtagccacaaaaaccgtttt
ggtgcggtgaatgaactcggtgtgtttgccatgaccgggcaaggattgcgtgaagtgagt
aacccgtcggcgattttcttgtcacgtggggaggaggcaacctctggtagttcggtgatg
gtggtttgggaaggcactaggccgcttctggtcgagatccaagctttggtggactattcg
cagcttgctaatcctcgtcgggtcgctgtcggtcttgagcaaaaccgtctctctttatta
ttagcggttttacataagcacggcggcttacaaatggctgaccaggatgtctttgtcaat
gtggtcggtggggtaaaggtgagtgaaactagcgctgacttggcgctgattatggcgcta
ctgtctagttttcgcgatcggccattgccaaaagatgtggtgatttttggcgaagtgggc
ttggctggcgagatccgcccggtacccagtggccaagaacgtctcaatgaagcgttcaag
catggctttaagaaagcgattgtccctatggccaatatgccgaaaggcggaatagtgggc
atgcagatccacggggtgaaaaaactcgccgatgcgatcagtgcttttgatgaactctag

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