Vibrio navarrensis: IF132_19365
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Entry
IF132_19365 CDS
T07785
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv03030
DNA replication
vnv03430
Mismatch repair
vnv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IF132_19365 (dnaQ)
03430 Mismatch repair
IF132_19365 (dnaQ)
03440 Homologous recombination
IF132_19365 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnv03032
]
IF132_19365 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vnv03400
]
IF132_19365 (dnaQ)
Enzymes [BR:
vnv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IF132_19365 (dnaQ)
DNA replication proteins [BR:
vnv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IF132_19365 (dnaQ)
DNA repair and recombination proteins [BR:
vnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IF132_19365 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QOD70772
LinkDB
All DBs
Position
1:2729554..2730285
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AA seq
243 aa
AA seq
DB search
MNTSNNSDHHRIVVLDTETTGMNREGGPHYLGHRIIEIGAVEIINRKLTGKHFHVYLKPD
REIQPEAIEVHGITDEFLLDKPEYRQVHEEFLQFIQGAELVAHNAPFDVGFMDYEFGLLN
AAIGKTTDFCQVTDTLAMAKKIFPGKRNNLDVLCERYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTSLEFNANKQEGGVEGIRRIEGRKSLKVLRATADELDAHQSRLDIVEKSGTCL
WRQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagtaacaattctgatcaccaccgtatcgttgtgctcgatacggaaaccaca
ggtatgaaccgagaaggtggcccgcactatctcgggcatcggattatcgagatcggtgcg
gttgagatcatcaaccgcaaactgaccggtaagcactttcatgtctacctaaaaccggac
cgagaaattcagccagaagcgattgaagtgcatggtattaccgatgagtttttgctcgat
aaaccggaatatcgtcaggtgcacgaggagtttttgcagtttattcaaggcgcagagctc
gttgcccacaacgcccccttcgacgttggcttcatggactatgaatttggcctgttgaat
gcggcgataggtaaaaccaccgatttctgccaagtgaccgatacgctggcgatggcgaag
aagatcttccccggcaagcgcaacaacctcgacgtgctttgtgagcgctatggtatcgat
aactcgcatcgtacattgcacggcgctttgctcgatgcggagatcctcgctgacgtctat
ctgttgatgacgggtgggcaaaccagtctggaatttaacgctaataaacaagaaggtggc
gttgaagggattcgccgcattgaagggcgaaaatcccttaaggttttacgcgcaacggcc
gatgaactagatgcgcatcaaagccgattagatatcgtagaaaaaagcggaacttgcctc
tggcgtcaatag
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