Vibrio navarrensis: IF132_19565
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Entry
IF132_19565 CDS
T07785
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vnv
Vibrio navarrensis
Pathway
vnv02020
Two-component system
vnv02040
Flagellar assembly
vnv05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IF132_19565
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IF132_19565
09142 Cell motility
02040 Flagellar assembly
IF132_19565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vnv02022
]
IF132_19565
02035 Bacterial motility proteins [BR:
vnv02035
]
IF132_19565
Two-component system [BR:
vnv02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
IF132_19565
Bacterial motility proteins [BR:
vnv02035
]
Flagellar system
Flagellar assembly proteins
Others
IF132_19565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_16
AAA_2
Mg_chelatase
DUF2089
HTH_20
MerR
MCM
HTH_24
HTH_11
AAA_19
HTH_Mga
FleQ
HTH_28
AAA_3
HTH_Crp_2
AAA
AAA_7
HTH_5
Sigma70_r4_2
HTH_10
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
QOD70809
LinkDB
All DBs
Position
1:2767969..2769381
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AA seq
470 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWLEADCAEDALLKLKAHSVDIVVSDVQMAGM
GGLALLRSIKQNWPNLPVLLMTAYANIEDAVSAMKEGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAVVADEKSLRLLALADKVARTDANVMVLGPSGSGKEVLSRYIHNASLRKDGP
FVAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVSEGNFREDLYYRLNVFPLTWPAL
RERQGDIVPLAKHLAERHCMKQGIAVPRFSPQALDKLTHYPWPGNVRELDNVVQRALILS
ENSDIEQDHILLEGVDWQDANSLQNVVQQTSDVVVPDVKPVAQPDAFSRSIVGGDSLGSE
LRDQEYAIILETLIECQGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaggtgttaatcgtagaagacgacgaaggtctgcgcgaagcgctggtc
gatacattggcattagcggggtatgaatggctcgaagcagattgcgccgaagatgcgcta
ctcaaactcaaagcccattcggtggatattgtggtctctgacgtacaaatggccggcatg
ggtgggcttgcactattgcgcagcatcaagcaaaactggccaaatttgcctgtgttgctg
atgacagcgtatgccaatattgaagacgctgtgtcagcgatgaaagaaggggcgattgac
tacatggccaagcctttcgcgccagaagtgttgctcaatatggtcagccgttacgcccct
gtcaaatcggacgacaatggtgacgcggtagtggcggatgaaaagagcttacgactgctt
gcgctggccgacaaagtcgcgcgcaccgacgccaacgtgatggtgcttggcccaagtggt
tcgggcaaagaagtgttatcgcgctacattcataatgcgtcgctgcgtaaagacgggcca
tttgttgcgattaactgtgccgcgatcccagataacatgctagaagccaccttgtttggc
tatgaaaaaggggcgttcactggcgcagtgcaagcttgtccgggcaaatttgaacaggcg
caaggtggtacgattctactcgatgagatcagtgaaatggatctcaacctgcaagccaaa
ctgctgcgcgtactgcaggagcgagaagtggagcgcctgggtagccgcaagagcatcaag
ttggatgtgcgcgtcctagccaccagtaaccgtgacttaaagcagtatgtttccgaaggg
aatttccgagaggatttgtattaccgtctgaatgttttcccattgacttggcctgcgcta
cgtgagcgccaaggggatatcgtaccgctcgccaaacatctggcagagcgtcactgcatg
aaacaggggattgcggtacctcgtttttcacctcaagcgctggacaaacttacgcattat
ccttggccgggtaacgtgcgcgagctagacaacgtggtgcagcgagccctcatcttaagt
gaaaacagcgatatcgagcaggatcatatcctgttagaaggggtagattggcaagacgcc
aacagtttgcaaaatgtggtgcagcagaccagcgatgtcgtagtgccggacgtcaaaccg
gtcgcgcagcctgatgcgtttagccgtagtatcgttggcggagatagcttaggtagcgaa
ttacgagatcaagagtatgccatcattttagagactttaattgaatgccaaggtcgccgc
aaagagatggcggaaaaactgggtatcagcccgagaaccttgcgctacaaactggctaag
atgcgtgatgctggtatcgatatcccgggatga
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