Vairimorpha necatrix: VNE69_01165
Help
Entry
VNE69_01165 CDS
T10154
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vnx Vairimorpha necatrix
Pathway
vnx03020
RNA polymerase
vnx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VNE69_01165
09124 Replication and repair
03420 Nucleotide excision repair
VNE69_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vnx03021
]
VNE69_01165
03400 DNA repair and recombination proteins [BR:
vnx03400
]
VNE69_01165
Enzymes [BR:
vnx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VNE69_01165
Transcription machinery [BR:
vnx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
VNE69_01165
DNA repair and recombination proteins [BR:
vnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
VNE69_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
90540029
NCBI-ProteinID:
XP_065328371
UniProt:
A0AAX4J8F4
LinkDB
All DBs
Position
1:969905..973390
Genome browser
AA seq
1161 aa
AA seq
DB search
MDLKYGKEYSWDIITKFFEQKGLVGQQIDSFDQFVKTKMQEVIDESPTITVQTTLSAGNE
SRRKITLKFGQIYVSKPPSYTEADGTTITLTPNEARLRDINYLSQLYIDVTKETESESGM
VDQHKYSRIPFGSLPIMVKSSYCSTYKLTDEELIKIGECEYDVGGYFIINGSEKVIIAQE
RMATNTIYVFKKSQPASYSHYAEIRSVPEKGAKNPSAVSLKLCKNPNVIRVSIPYSKQEI
PLFIIYRALGFLSDKEITDHIVTSNDEEMFDILKDSILESTVVQDQNVALDYIGKRSAPV
GSSREKRINFARDLLAKELLPHIGTQEFNETKKAYFLGYMVQKLLMVALGRKKEDDRDHY
GKKRMDLAGPLLASLFRSLYKKLCSETAKHMQKCLEGGRDFNIALGLKASTIAQGFRYAI
ATGNWGDQAQAMQSKAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAKPRQLHNTHWGM
ICPAETPEGQACGLVKNLSLMAYISVGSSSEPIIEFLEECGLESLEELSHFQLQNSTKIF
VNGVWVGIHEDPEYLINSLRLLRRSLEIDKEVSIVRDIREREIRIQSDSGRPCRPLFVVK
NNKLCIDEAYSNKEEIKRCTWNEFIENGLIEFLDVEEEEVSMIAMSPDQLNENRFNTKDL
RYNNNIRKDRSKDVDFDNNSTSLNYTHCEIHPATILGICASVIPFPDHNQSPRNTYQSAM
VKQAMGVFATNFMLRMDTLSNILYYPQKPLVTTKSMEYMKFKELPPGQNAIVAIASYTGY
NQEDSIIMNQSAIDRGLFRSFFYRTYTDQENTTRPGAHEEFCKPNRSEVLRMRNLNYSKL
DEDGIIPIGVRVTGDDVLIGKVSPILDPERSTKANPVYLKKDSSTSMRRTENGFVDSVIV
TNKDGYKFAKVKVRTSRIPQMGDKFASRHAQKGTMGISLRQEDMPFTSEGIVPDIIINPH
AIPSRMTIGHLIECLLGKTCALTGEEGDATPFNGVTVDSISQKLKEFNYQQRGFEVMYNG
MTGHKLRAQIFIGPTYYQRLKHMVEDKIHARAKGPLQILTRQPVEGRSRDGGLRFGEMER
DCIISHGASAFLKERLMDVSDPYKCSVCDECGLIAIDTKRYKECKGCHNRTNIKMVEIPY
AFKLLIQELMAMNIAPRIRAE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaatatggtaaagaatatagttgggacataattactaaattctttgaacag
aaaggccttgtaggtcaacaaattgattcttttgatcaatttgtcaagactaaaatgcaa
gaagtaattgacgaatctcccacgatcaccgttcaaactactctctctgctggtaatgag
tcaaggagaaaaataactctaaaatttggccaaatttatgtctctaagcctccttcttat
acagaggcagatggtacgacaattacgcttacgccaaatgaggccagactcagagatata
aattatttatcgcagttgtacatagacgtcactaaagagactgaaagtgaaagcggcatg
gtcgatcagcataaatattcaagaatacctttcggaagtctaccaattatggtcaagtct
tcatattgttcgacatacaaattgacagacgaagagttgattaaaattggggaatgtgaa
tatgacgtaggaggatattttatcattaatggatctgagaaagttattattgctcaagag
agaatggcgactaatacgatttatgtttttaagaaatctcaacccgcgtcatattctcat
tatgcagaaataaggtcagtaccagaaaagggcgccaaaaatccaagtgcagtttctttg
aaattatgtaaaaatccaaatgtcattagagtttcaattccgtactctaaacaagaaatt
cctctttttataatttacagagctcttggttttcttagtgacaaggaaattacagaccac
atcgtcacttctaatgatgaagaaatgtttgatattttaaaagatagcattttagaatct
actgtagtacaagaccaaaatgtagctttggattatattgggaagagatctgctcctgtt
ggatcttctagagaaaaaagaataaattttgccagagatttgctggccaaggaattattg
cctcatatcgggacacaagaatttaatgagacaaaaaaggcgtatttcttaggctacatg
gtccagaagcttcttatggtagcattaggaagaaagaaggaagatgatagagatcattat
gggaaaaagagaatggacttggctggtcctttactggcttctttgttcagatctttgtat
aagaaattgtgttctgagactgccaagcacatgcagaaatgtctagaaggaggcagagat
ttcaatattgccctaggattaaaagcgagtacaatagctcaaggcttcagatatgccata
gcaactggtaattggggagatcaagctcaggccatgcagtccaaggcgggagtggcccaa
gttctgaatagatacaattttgtctctacgttgagtcatctaaggagagtcaacacacca
atagaaaaagagggcaaattggccaagccccgtcagttacacaatacgcattgggggatg
atttgtcccgccgagaccccagagggccaagcctgtgggcttgtgaagaatctttctctg
atggcttacatttccgtgggctcgtcttctgagccaattattgaatttctagaagaatgt
ggcctagagagtcttgaagagctttctcattttcagttacaaaattctactaaaattttt
gtaaatggtgtctgggttggaattcacgaagatccagaatatttgataaattccttgaga
ttattaaggagatctttagaaattgataaagaagtgagtattgtgagagacataagagaa
agagaaattagaattcagtctgattcagggcgaccatgtcgccctttatttgtagtaaag
aataataagttgtgcatagatgaagcgtattctaataaagaagaaattaagagatgcact
tggaatgaattcatagaaaatggacttattgagtttttagatgtagaagaagaagaagtt
tcaatgatagccatgtctccagatcaacttaatgaaaacagatttaataccaaagattta
agatataataataatatccgcaaggatcgaagtaaagacgttgatttcgataataatagt
actagtttgaattacacacattgtgaaatccatcctgctactattttggggatttgtgcc
tctgttattcctttccctgatcataatcagagtcctcgtaatacttaccagagtgctatg
gtcaaacaagccatgggagtctttgctactaatttcatgcttagaatggacacgctgagt
aatattctctattatcctcagaaaccactggtcactactaaaagtatggaatatatgaaa
ttcaaagaacttcctcctggtcagaatgccatagtggctatagcttcgtatacggggtac
aatcaagaagacagtataataatgaatcaaagcgccatagacagaggcctctttaggagc
ttcttctatagaacttatactgatcaagaaaatacaacccgaccaggagcccacgaggaa
ttctgtaaaccaaacaggagtgaagttcttaggatgagaaatctgaattattccaaatta
gacgaggatgggattattcccataggagtcagagtgactggagatgatgtgttaatagga
aaagtaagtccaattctagacccagaaagaagtactaaggcgaacccagtgtacttgaaa
aaagacagtagtacaagtatgaggaggactgagaatggatttgtagacagtgtaatagtc
acaaataaggacgggtataaattcgcgaaagtgaaagtgaggactagtcgaattccacaa
atgggcgacaagtttgcgtctcgtcatgcccagaaggggaccatgggaataagtttgaga
caggaagacatgccttttacatctgaaggaatagtcccggatatcattattaatcctcat
gctataccaagtagaatgactataggccacttaatagagtgtctgttggggaagacatgt
gctttgactggggaagaaggagacgccacccctttcaatggagtgacagtggacagcata
agccagaaactgaaagagtttaattatcaacaaaggggattcgaagtcatgtacaatgga
atgacagggcataaactcagggctcaaatctttataggcccgacttattaccaaaggctt
aagcacatggtcgaggacaaaatccacgcccgggcgaaggggccgcttcaaattctgact
cgtcagcctgtagaaggccgatcgagggacggaggcctgagattcggggaaatggagcgt
gactgcataatttcccatggtgcttctgcgtttcttaaagagagactgatggatgtcagt
gatccgtacaaatgttcagtgtgcgatgaatgtggacttatagctattgatactaagaga
tataaagagtgtaaaggatgtcataataggactaatataaaaatggtagaaataccttat
gcgtttaaattattaatacaagaattaatggccatgaatatagcacccagaataagagcc
gaataa
DBGET
integrated database retrieval system
