KEGG   Vairimorpha necatrix: VNE69_02165
Entry
VNE69_02165       CDS       T10154                                 
Name
(RefSeq) DNA mismatch repair protein MSH6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
vnx  Vairimorpha necatrix
Pathway
vnx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vnx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    VNE69_02165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vnx03400]
    VNE69_02165
DNA repair and recombination proteins [BR:vnx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     VNE69_02165
SSDB
Motif
Pfam: MutS_V MutS_I MutS_III MutS_IV FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 90540455
NCBI-ProteinID: XP_065328788
UniProt: A0AAX4J9L5
LinkDB
Position
2:639096..641927
AA seq 943 aa
MHNLKDFIKKQSEKKKEEFLLSTSEEEMFSSLDSPKKILKSSTEGNINDTIITNNSTIIN
DTYNRNNNDTSTNNSNNNSTNNRNMESGGRYNFLKDIKDKNGNSPTSPNYDKSSLFISPS
DLQTLSPFERQFWSIKKDYFDTVVFFKKGKFYELYENDADIASRLFNFRITDRVNMRMAG
FPESSLDDWICKFLEAGYKIARVDQLDNMVSKKMKDDKEKILQRELKEVITQGTVADMNH
LKTNDSVCTLVIHENTTNISDDTSFNFDIMLFDASTNKIFCKTFTDDENLNTLKTISTKY
TIKEYISKRKYNFLKNFIKAEISTTTSDTNCNISSSSMCYGYLYNYMKYLKREKSLNSCQ
FINLDSDSSGLSLDSNTIKNMDLISTEHDKTLFKLINYCSTPFGQRKLMNWMMTPFGNYK
EIKERQELIKIIGEKDIENIEKNMKELGDLERGFSKIRSGNGKFKDLKEIIKKTEIIIKI
YEIIMEIFSDKINDKDKNNDNSINIKDRDGDSGKKRAKIYNETNLKETKHNEFINKIVEI
KTGEKYQFINRTKLINFIKDYNLNYKIKDDEIVPGKNNSEEISRLLEDKKNIIKKFDEIL
EKEKIKLKCKEINYKNVGKEIFQLEVPKNINNKVCDQDSVISKNDTNNYFLVSSTKSCNR
FYTTEIRSLISEFQILEEKIFQANGKLFNHAVSYFLKSEDLFFNIINDLSDLDCLISSVK
FNLKIQGCVPVESNILNVENMGNPIYKEYIRNNYKESNNILILTGSNMAGKSTFMRSLCL
NIILYQMGLNVLASKFECSVFDKLYSRMGASDNLRRGESTFMVELNETCHILKNATNRSL
VIMDELGRGTSTKDGECIARAVLKKLEEIKCRVLFSTHYHNLILMKYSHGFMNTMIKGGR
VVFLYKLKEGRCEDSNGVYVAKLAGVPEEIIKRAEVYKNKYEI
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgcataatttgaaggattttataaaaaaacaatctgagaaaaaaaaggaagaatttctt
ctctctacgagtgaggaggaaatgttcagttcacttgacagtcccaagaagatactcaag
tcatcaacagagggcaacataaatgacaccataataactaataatagtactattattaat
gatacatataatagaaataataatgatactagtactaataatagtaataataatagtaca
aataatagaaatatggaatctggtggaagatataacttcctaaaggatatcaaagataaa
aatggtaattcacccacaagtccaaattacgacaaatcttctttattcatctccccctcg
gacttacaaaccctaagtccctttgagagacaattctggtctatcaaaaaggactacttc
gacactgtcgtcttttttaaaaaaggaaaattctacgaattatacgaaaatgacgcggac
atcgcttcaaggctctttaatttcaggatcactgacagggtgaacatgcgtatggcaggg
ttccctgagagcagcctcgatgactggatttgtaaatttctagaagcggggtataaaata
gccagagtcgaccaacttgataatatggtgagtaaaaagatgaaagatgataaagagaag
atattacaaagagagttgaaagaagttataacacaagggacagtagcagatatgaatcat
ttaaaaacaaatgactctgtgtgtacattagtaatacatgaaaatacaacaaatatttct
gacgatacttcttttaattttgatattatgttatttgatgcttcaactaataaaatattt
tgtaaaacttttacagatgatgaaaatttgaacactctgaaaacaatatctacaaaatac
acgatcaaggaatatatttcaaaaaggaaatataatttcttaaaaaacttcataaaagca
gaaatatctactactactagtgatactaattgtaatattagtagtagtagtatgtgctat
ggatatttatataactatatgaaatatctaaaaagagaaaaatctctaaattcttgtcaa
tttataaacttagactctgactcatctggtctatctctagactcaaatactataaaaaac
atggacttaatcagtacagaacacgataaaactttatttaaacttataaattattgtagt
acacccttcgggcagagaaaactaatgaactggatgatgacaccctttggaaattataaa
gaaataaaagaaagacaagaacttataaaaattataggggaaaaagatatagaaaatata
gagaaaaatatgaaagaacttggagatttagaaagaggatttagtaaaatacggagcggg
aatgggaaatttaaagatttaaaagagataataaaaaaaacagagataataataaaaata
tatgagatcattatggagatatttagtgataaaataaatgacaaagataaaaataatgat
aatagtataaatataaaggatagagacggagatagtgggaagaaacgagcaaaaatttac
aatgaaacaaatttgaaagaaacaaaacacaacgaatttataaacaaaattgtagaaatc
aaaacaggtgaaaaatatcaatttataaataggacaaaattgataaattttataaaagat
tacaatttaaactacaaaataaaagatgacgaaattgtaccgggaaaaaataattcagaa
gaaatctcaagactactggaagataaaaaaaatataataaaaaaatttgacgaaatttta
gaaaaggaaaaaattaaactgaaatgtaaagaaataaattataaaaatgtaggaaaagaa
atattccaactggaggtgcctaagaacataaataataaagtatgtgatcaagatagtgta
ataagtaaaaatgatactaataattacttcctggtgagttccacaaaatcttgtaataga
ttttatactacagaaattagaagtctaatttctgaattccaaattctagaagaaaaaatc
ttccaggcaaatgggaaattattcaatcacgcagtttcatacttcttaaaaagtgaagat
ttattctttaacattataaacgatctatcagatttagactgcttaatttcaagtgtaaaa
ttcaacctaaaaattcaaggatgtgtaccagttgaatcaaacatattaaatgtagaaaat
atgggtaatccaatatataaagaatatataagaaataattataaagaatccaataatatc
ttaatactaacaggatcaaatatggcagggaaatctacattcatgagatcactctgtcta
aatataattctataccaaatgggtctaaacgtactagccagtaaatttgagtgttccgta
tttgacaaattatattcaagaatgggcgccagtgacaatttgagacgaggcgagtcgact
tttatggtagaattaaatgagacatgtcatatactaaaaaacgcgacaaacagatcatta
gtcataatggatgaattaggacgaggaactagtacaaaagacggggaatgtatagcgaga
gcagtacttaaaaaattagaagagataaaatgtcgtgtactgtttagtacacattatcat
aatttaatattgatgaagtatagtcatggatttatgaatacgatgataaaaggaggaaga
gtggtgtttttgtataaacttaaagaagggagatgtgaagactcgaatggggtttatgtg
gcgaaacttgcaggtgtgcctgaggaaataataaaaagagcagaggtttataaaaataag
tatgaaatatga

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