Vairimorpha necatrix: VNE69_02165
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Entry
VNE69_02165 CDS
T10154
Name
(RefSeq) DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
vnx Vairimorpha necatrix
Pathway
vnx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VNE69_02165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnx03400
]
VNE69_02165
DNA repair and recombination proteins [BR:
vnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VNE69_02165
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
90540455
NCBI-ProteinID:
XP_065328788
UniProt:
A0AAX4J9L5
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Position
2:639096..641927
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AA seq
943 aa
AA seq
DB search
MHNLKDFIKKQSEKKKEEFLLSTSEEEMFSSLDSPKKILKSSTEGNINDTIITNNSTIIN
DTYNRNNNDTSTNNSNNNSTNNRNMESGGRYNFLKDIKDKNGNSPTSPNYDKSSLFISPS
DLQTLSPFERQFWSIKKDYFDTVVFFKKGKFYELYENDADIASRLFNFRITDRVNMRMAG
FPESSLDDWICKFLEAGYKIARVDQLDNMVSKKMKDDKEKILQRELKEVITQGTVADMNH
LKTNDSVCTLVIHENTTNISDDTSFNFDIMLFDASTNKIFCKTFTDDENLNTLKTISTKY
TIKEYISKRKYNFLKNFIKAEISTTTSDTNCNISSSSMCYGYLYNYMKYLKREKSLNSCQ
FINLDSDSSGLSLDSNTIKNMDLISTEHDKTLFKLINYCSTPFGQRKLMNWMMTPFGNYK
EIKERQELIKIIGEKDIENIEKNMKELGDLERGFSKIRSGNGKFKDLKEIIKKTEIIIKI
YEIIMEIFSDKINDKDKNNDNSINIKDRDGDSGKKRAKIYNETNLKETKHNEFINKIVEI
KTGEKYQFINRTKLINFIKDYNLNYKIKDDEIVPGKNNSEEISRLLEDKKNIIKKFDEIL
EKEKIKLKCKEINYKNVGKEIFQLEVPKNINNKVCDQDSVISKNDTNNYFLVSSTKSCNR
FYTTEIRSLISEFQILEEKIFQANGKLFNHAVSYFLKSEDLFFNIINDLSDLDCLISSVK
FNLKIQGCVPVESNILNVENMGNPIYKEYIRNNYKESNNILILTGSNMAGKSTFMRSLCL
NIILYQMGLNVLASKFECSVFDKLYSRMGASDNLRRGESTFMVELNETCHILKNATNRSL
VIMDELGRGTSTKDGECIARAVLKKLEEIKCRVLFSTHYHNLILMKYSHGFMNTMIKGGR
VVFLYKLKEGRCEDSNGVYVAKLAGVPEEIIKRAEVYKNKYEI
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcataatttgaaggattttataaaaaaacaatctgagaaaaaaaaggaagaatttctt
ctctctacgagtgaggaggaaatgttcagttcacttgacagtcccaagaagatactcaag
tcatcaacagagggcaacataaatgacaccataataactaataatagtactattattaat
gatacatataatagaaataataatgatactagtactaataatagtaataataatagtaca
aataatagaaatatggaatctggtggaagatataacttcctaaaggatatcaaagataaa
aatggtaattcacccacaagtccaaattacgacaaatcttctttattcatctccccctcg
gacttacaaaccctaagtccctttgagagacaattctggtctatcaaaaaggactacttc
gacactgtcgtcttttttaaaaaaggaaaattctacgaattatacgaaaatgacgcggac
atcgcttcaaggctctttaatttcaggatcactgacagggtgaacatgcgtatggcaggg
ttccctgagagcagcctcgatgactggatttgtaaatttctagaagcggggtataaaata
gccagagtcgaccaacttgataatatggtgagtaaaaagatgaaagatgataaagagaag
atattacaaagagagttgaaagaagttataacacaagggacagtagcagatatgaatcat
ttaaaaacaaatgactctgtgtgtacattagtaatacatgaaaatacaacaaatatttct
gacgatacttcttttaattttgatattatgttatttgatgcttcaactaataaaatattt
tgtaaaacttttacagatgatgaaaatttgaacactctgaaaacaatatctacaaaatac
acgatcaaggaatatatttcaaaaaggaaatataatttcttaaaaaacttcataaaagca
gaaatatctactactactagtgatactaattgtaatattagtagtagtagtatgtgctat
ggatatttatataactatatgaaatatctaaaaagagaaaaatctctaaattcttgtcaa
tttataaacttagactctgactcatctggtctatctctagactcaaatactataaaaaac
atggacttaatcagtacagaacacgataaaactttatttaaacttataaattattgtagt
acacccttcgggcagagaaaactaatgaactggatgatgacaccctttggaaattataaa
gaaataaaagaaagacaagaacttataaaaattataggggaaaaagatatagaaaatata
gagaaaaatatgaaagaacttggagatttagaaagaggatttagtaaaatacggagcggg
aatgggaaatttaaagatttaaaagagataataaaaaaaacagagataataataaaaata
tatgagatcattatggagatatttagtgataaaataaatgacaaagataaaaataatgat
aatagtataaatataaaggatagagacggagatagtgggaagaaacgagcaaaaatttac
aatgaaacaaatttgaaagaaacaaaacacaacgaatttataaacaaaattgtagaaatc
aaaacaggtgaaaaatatcaatttataaataggacaaaattgataaattttataaaagat
tacaatttaaactacaaaataaaagatgacgaaattgtaccgggaaaaaataattcagaa
gaaatctcaagactactggaagataaaaaaaatataataaaaaaatttgacgaaatttta
gaaaaggaaaaaattaaactgaaatgtaaagaaataaattataaaaatgtaggaaaagaa
atattccaactggaggtgcctaagaacataaataataaagtatgtgatcaagatagtgta
ataagtaaaaatgatactaataattacttcctggtgagttccacaaaatcttgtaataga
ttttatactacagaaattagaagtctaatttctgaattccaaattctagaagaaaaaatc
ttccaggcaaatgggaaattattcaatcacgcagtttcatacttcttaaaaagtgaagat
ttattctttaacattataaacgatctatcagatttagactgcttaatttcaagtgtaaaa
ttcaacctaaaaattcaaggatgtgtaccagttgaatcaaacatattaaatgtagaaaat
atgggtaatccaatatataaagaatatataagaaataattataaagaatccaataatatc
ttaatactaacaggatcaaatatggcagggaaatctacattcatgagatcactctgtcta
aatataattctataccaaatgggtctaaacgtactagccagtaaatttgagtgttccgta
tttgacaaattatattcaagaatgggcgccagtgacaatttgagacgaggcgagtcgact
tttatggtagaattaaatgagacatgtcatatactaaaaaacgcgacaaacagatcatta
gtcataatggatgaattaggacgaggaactagtacaaaagacggggaatgtatagcgaga
gcagtacttaaaaaattagaagagataaaatgtcgtgtactgtttagtacacattatcat
aatttaatattgatgaagtatagtcatggatttatgaatacgatgataaaaggaggaaga
gtggtgtttttgtataaacttaaagaagggagatgtgaagactcgaatggggtttatgtg
gcgaaacttgcaggtgtgcctgaggaaataataaaaagagcagaggtttataaaaataag
tatgaaatatga
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