Vairimorpha necatrix: VNE69_03289
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Entry
VNE69_03289 CDS
T10154
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
vnx Vairimorpha necatrix
Pathway
vnx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VNE69_03289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vnx03021
]
VNE69_03289
Enzymes [BR:
vnx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VNE69_03289
Transcription machinery [BR:
vnx03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
VNE69_03289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-GeneID:
90540885
NCBI-ProteinID:
XP_065329223
UniProt:
A0AAX4JAT7
LinkDB
All DBs
Position
3:1122957..1126976
Genome browser
AA seq
1339 aa
AA seq
DB search
MNRDTNLIKNKINKISFGLLSSQEIEKLSVHSLTSKDLYDVITKSPMSDGPLDRRLGVSN
KKDKCLTCNENIVNCLGHFGNIKLILPVYHIGLIKQTLFILSCVCKNCGKILLSEKKKNF
YKNLLREIKNKNDQILLLRKINVECKKTTLCLECQTVNGTIKKGTGFKILHEIEKNNGRK
DKKNFSKKIEDINPLVALNIFSMIKPEDYEYLGLEDNPEKFIIQNVIVPPACIRPSVGMA
ERDSTNEDDLTIKISEIIHTNFVLKESIEKGNPVNIINDDWDLLQLQCALMINSDLPQVN
VQSQPIKGLVQRLKGKSGRFRCNLSGKRVDFSGRTVISPNPNLTIDQVDVPEYMAKILTI
PEKVTKFNKEKLQKLIKNGPLIYPGANYIINNKCKKFLLYGGKEDELLEGDIVERHLTNN
DVVLFNRQPSLHRMSIMAHYVNIHKNKTLRFNECVCSPYNADFDGDEMNIHVPQTLEAIA
ECIELMGVKENIVTARHGEPLIAATQDFITALYLITSKDTFFDRKKFGQLLAHFCRSRIE
ISPVIVKPVELFTGKQLVEAMIHDSLEDKRLIKEITLNAKNRSFSKWDHTDSFFVVREGK
YLFGRIDKNIIGGESKKNSILYLLMTIEKHSSAQMMYNITRVASRYLGEVGFSIGLVDVL
PGKNLQIKKTEVVDEGYKKCKEIIKNISEINKEESEMEISSTLNQIREECGSICIKELST
YNSPIIMQACGSKGSKINVSQMIACVGQQIISGKRIPNGMLDRTLPHFDKFSMTPESKGF
VENSFYTGMKPAEFFFHAVSGREGLVDTAVKTAETGYTQRRLMKALEDLNVKYDYSVRSS
FNEIIQYKYGEDGIDPLVMECDDFIDLEKVFISVETKLTAFSPNLLNDKSIDNEYNDKLT
EQDSYKKILICNKNKTLEFDHKNNLTEDKIVKIIYEKFDSMKKDPFIRNYCLNILNDDFY
KKISDFLLSKINSVIFNGYKFIKILSTCQFFNLFFNKLKNKIKNSVIEPGTAVGAIAGQS
IGEPGTQMTLKTFHFAGVASMNITLGVPRLIEIINAVSNINTPIINVSLSKNDLLNAQLV
KGRLLKVLVRDICSKVTESVSKNDIFVDFEFDINLINKLRLQVDTKSIKQSLNINEQISI
IDDNKLRIIFKNGINQALYNIQKIKKKIMNTKINGLSSVNKVLLHNDKGIYKCIVEGHGL
QTILGTKGVDYKNTTSNAILEIQEVLGIEAARAHIISEIEYVVGKHGIKIDPRHVMLLAD
TMTYKGEVLGITRFGISKMSCSTLMLASFEQTSDHLFDAAIRNKSEDVRGVSESIILGKP
IGLGTGGVELYWDGENKLP
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagacacaaatctgataaaaaataaaataaataaaatctctttcggcttgttg
tcaagtcaagaaattgaaaaattatcagtccattctctaacctctaaagatttatacgac
gtaataacaaaatcgcctatgtctgacgggcctctggacagaagactgggtgtcagtaac
aaaaaagacaaatgtctaacatgtaacgaaaatatcgtaaattgtctaggtcacttcgga
aacattaaacttattcttcctgtttaccatattggtctaataaaacaaactctttttatt
ttatcttgtgtctgtaaaaattgcggaaaaattttattatcagaaaaaaagaaaaatttt
tataaaaatttattacgggaaataaaaaataaaaatgatcagattttattattacggaaa
attaatgttgaatgtaaaaaaacaacactgtgtttagaatgtcaaacagtgaacggtact
ataaaaaaaggaacaggatttaaaatattacatgagatagaaaaaaataacggaaggaaa
gataaaaaaaattttagtaagaaaatcgaagatataaacccgcttgttgctttaaatatt
ttttctatgataaaaccagaagattatgaatatctcggccttgaagacaacccagagaaa
tttataattcaaaatgtcattgtgccgcccgcttgtattaggccgagcgtggggatggcg
gaacgggacagcacaaatgaagacgatttgactataaaaatatcagaaattatacatacg
aattttgtactaaaagaaagtattgaaaaaggaaatcctgtgaatatcatcaatgatgac
tgggatttgcttcaattacaatgtgctctaatgatcaattctgatctaccacaagttaat
gtccagtcccaacctattaaagggttggtccaaagattgaaagggaaaagtgggcggttt
agatgcaatttaagtggaaaaagagtggattttagtggtagaacagtcatttctccaaat
ccaaatctcactatcgaccaagttgatgtcccagaatacatggcgaaaattttgactata
ccagaaaaagtaaccaaattcaataaagaaaaattacaaaaattaataaaaaatggtcca
ttaatttatcctggtgccaattatataattaataacaaatgtaaaaaatttttactttac
ggtggtaaagaagatgaattattagaaggcgacattgtagaaagacatctcaccaataat
gacgtagtgctttttaatagacaaccttctttacatagaatgagcatcatggcgcattat
gtcaacattcataaaaataaaactttgaggtttaacgagtgcgtctgctcgccgtataac
gcggattttgacggggacgaaatgaacatccatgtgccgcaaacattagaagctatcgct
gagtgtattgaattaatgggtgttaaagaaaatattgtgacggctagacatggagaacca
ttgatagctgctacacaagattttattacagctttgtatttgataacttcgaaagacact
ttttttgatcgtaaaaaatttggccaacttcttgctcatttttgtaggtcaagaattgaa
atttcgcctgttattgtcaagcctgtggaattgttcactggtaaacaactcgtagaagct
atgattcatgattctttagaagataaaagattaattaaagaaattacactaaatgctaag
aatagatcttttagtaagtgggaccacactgattccttctttgtagtacgagaaggcaag
tatttattcggtcgtattgataaaaacatcataggaggcgaatctaaaaaaaatagcatt
ttatatttattaatgaccatagaaaaacattcatcggcacagatgatgtacaacataacg
agagtggcctctcgttatctaggcgaagtggggtttagcatcggcctcgtcgatgtttta
ccgggaaaaaatttacaaattaaaaaaactgaagtagtagacgaaggctataaaaaatgt
aaagaaattattaaaaatataagcgaaataaataaagaagaatcagaaatggagatttct
agtacattaaatcaaattagagaagaatgcgggtcgatttgtattaaagaactaagtacc
tacaattcgccgattataatgcaagcttgtggaagtaaaggcagtaaaatcaatgtgtca
caaatgatagcttgtgtaggtcagcaaattataagtgggaaacgaattcccaatggaatg
ttggacagaactctgccacattttgataaatttagtatgacgccagaatccaaaggattc
gtggaaaactctttttacacggggatgaaaccagccgaattctttttccacgctgtaagc
gggcgggaaggtttggtcgacacggccgtcaagacggcagagactgggtacacacagagg
agacttatgaaagctctggaagatttaaatgttaaatatgattacagtgtaagatcttct
tttaatgagattatacagtacaaatatggcgaagatggtattgatccactagtaatggaa
tgtgatgattttatagatttagaaaaggtttttatttccgtagagacgaaattgacggcc
ttttcgccgaatcttctaaatgataaatcaatagacaatgaatataatgataaattaaca
gaacaagattcttataagaaaatcttaatttgcaataaaaacaagaccctggaatttgat
cataaaaataatttaacagaagataaaattgtcaaaattatttatgaaaaatttgactcg
atgaaaaaagacccttttattagaaattattgtctaaatattttaaatgatgatttttat
aaaaaaatctcggattttttattatcaaaaattaattctgtaattttcaatggttacaaa
tttataaaaattttgtctacttgtcagttttttaatttattttttaataaattaaaaaat
aaaattaagaatagtgtaatagaaccaggtacagcagtaggcgccatagcaggacaaagt
atcggtgaaccggggacacaaatgactcttaaaacttttcatttcgctggtgttgccagt
atgaatattacactaggagtacctcgtcttatagaaattattaatgctgtgtctaatatt
aatacgccaattataaatgtatcattaagtaagaatgacttattgaatgcgcaattagtt
aaaggcagacttctcaaagttttagtacgagatatttgtagtaaagtaacagagtctgtt
agtaaaaacgatatatttgtggattttgaatttgatattaatttaattaataaattaagg
ttacaagtagatactaaatcaataaaacagagtttaaatattaatgagcaaatatcaata
atagacgataataaattaagaataatatttaaaaatggtataaaccaggccttgtataat
attcagaagattaagaagaagatcatgaatacgaaaataaatggattgtcatcagtgaat
aaagttttattgcacaatgacaagggaatatacaagtgtattgtcgaaggccatggttta
cagaccattttagggaccaaaggggtagattacaagaacaccaccagtaatgccatttta
gaaatacaagaagttttgggaatcgaggcggctagagctcatattattagtgaaatagag
tatgtggtagggaaacatggaataaaaatcgacccgaggcatgtcatgctcttggccgac
acaatgacttacaaaggggaagtgctaggaattactagatttggtatatcgaaaatgtct
tgtagcactttgatgctggcctcatttgagcagaccagtgatcatctgttcgacgctgcc
atacgaaataaatctgaagatgtgcgaggagtaagcgagtcgattatacttgggaaacct
ataggattaggcacaggaggagtagaattatattgggatggagaaaataaactaccataa
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