Vairimorpha necatrix: VNE69_05149
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Entry
VNE69_05149 CDS
T10154
Name
(RefSeq) U3 small nucleolar RNA-associated protein 12 (UTP12)
KO
K11374
elongator complex protein 2
Organism
vnx Vairimorpha necatrix
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnx03016
]
VNE69_05149
Transfer RNA biogenesis [BR:
vnx03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
VNE69_05149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_Vps41
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_like
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_WDR75_1st
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_RSE1_2nd
RAB3GAP2_N
CFAP43_N
Mcl1_mid
Motif
Other DBs
NCBI-GeneID:
90541373
NCBI-ProteinID:
XP_065329705
UniProt:
A0AAX4JC61
LinkDB
All DBs
Position
5:join(787956..788792,788849..790036)
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AA seq
674 aa
AA seq
DB search
MIRQTVFGGCNIKTRTSLFHEDGVYFCSSSNILITDDVKVKEVVFLDGFLNFVQVVNSDF
LLSGDNLGNLYLVRKGKEANLLDSAKQEKLKSNKNRSEKMSNEEWVVDKIPFYNYLQDAC
FVDPNFIVCAFLKAIKIYDFKNMSIKSEIELNTVISCMNCNDSFVYVGTTNGDLFIYNLD
LVLKHTIKIHDDRVQDLKFKKINQTIFMISSSTDSTIKIWQINKKFLKHVQTLVGHNDWV
SQVNWTQDNSILSSSSDKTIRLWKFTDLKWECDTILGGAWIFYKFDECISDFISGHTDSV
TKLDWSKNYLLSTSLDKTVRIFYNNREVGRPLTHGYEIQTGAFVEDWNLRIIVGGNETIL
RVLKPTYLFYQSCEWMKNNLKQIAEMHNNKTNLDDKNQQIHISEEEDLIFDETDFKFASV
PAELSLTNDDIDHYDFQNVNEFLLSTTGFSEIKKVYGHYFEISDLAVSKNFIASSNKSLT
KKFGGVFLWNKKLENIDYLEVHSYGINKLRFSPDEKYLCSVSKDKTSCIYEITHSNDTIN
IINDKWLKVKYINNDHKRIVWDCAFSFDSKYIATCSRDKNVFIYDLQEENKIVANFVFQN
EVTALDFGPKNYTLVAGTEKGEIHKIIKKEGDFKLQEEIIRAHSQGVTVIRFNKKGDLVA
TGGHDGLINIYKQE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacagactgttttcggtggctgcaatatcaaaactagaacttctctgttccat
gaagatggtgtttatttttgttccagttcgaatattcttatcacagatgatgtgaaagtc
aaagaggttgtttttttagacggttttttgaattttgtacaagtggtgaattctgatttt
ttattgtcaggggataatttagggaatttatatttagtaagaaaaggaaaggaagcaaat
ttgcttgatagtgccaaacaagaaaaattaaaatctaataaaaatagatctgaaaaaatg
agcaatgaagaatgggtagtcgataaaatccctttttataattatttacaagacgcctgt
tttgtagacccgaattttatagtctgcgccttcctcaaagcaatcaaaatttacgacttt
aaaaatatgagtattaaatctgagatagaattgaacacagtaatctcctgtatgaattgc
aatgactcatttgtctatgtaggcactactaatggtgacttgtttatttacaacttagac
ttggtcctcaagcacactataaaaatccacgacgacagagtccaggacttaaaattcaag
aaaattaaccagacgatttttatgatttcaagctcgacagactcgaccatcaaaatatgg
caaataaataagaaatttttaaaacatgtccagactttagtcggccacaatgactgggtt
tcccaagtaaactggacacaagataattcgattttaagttcttcctctgataaaacaatt
agactttggaagtttacagatttaaaatgggaatgtgacactattttaggaggtgcttgg
atcttttacaaatttgacgagtgtattagtgacttcatttctgggcacacagacagtgtc
actaaattagattggagtaagaattatttactgagtacaagtttggataagacagtgagg
atattttacaataatagagaagtggggagacctttgacacatgggtatgaaatacaaaca
ggagcgtttgtagaagattggaatttgaggataatagtaggcggaaatgagacgattttg
agggtattaaagccgacttatttattttatcaatcatgtgaatggatgaagaacaatctc
aagcaaatagcagaaatgcacaataataaaacaaatttagatgataaaaaccaacaaatt
catatttcagaggaagaagacctcatatttgatgagactgactttaagttcgcttcagtc
cccgccgagttatctctgaccaatgatgacatagaccactacgacttccaaaatgtaaac
gaatttcttctttctaccacaggcttctcagaaataaaaaaggtctacgggcactacttc
gagatatccgacctggcagtaagtaagaattttatagcttcctcaaataagtctcttact
aagaaattcgggggtgtttttctctggaataagaagcttgagaatattgattatttagaa
gtgcactcgtatgggattaataaattgagattttcccctgatgaaaaatatttgtgttct
gtttctaaagacaagacatcttgtatttatgagattactcactcaaatgatacaattaat
attataaatgataaatggttaaaggttaaatatattaataatgaccataagagaatagtc
tgggactgcgctttctcttttgactcaaaatatatcgccacttgtagcagagacaaaaat
gtcttcatttacgacttacaagaagaaaataaaatagtcgcaaatttcgtcttccagaat
gaagtcactgccttggacttcggcccaaaaaattacaccctcgtggcgggcacagagaaa
ggggaaattcataaaattataaagaaagagggcgactttaaattacaagaagaaatcata
cgagcacacagccagggggtgacagtcataagatttaataaaaaaggagatttagtagcc
acaggcgggcatgatggcctgataaatatttataaacaagaataa
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