KEGG   Vairimorpha necatrix: VNE69_07043
Entry
VNE69_07043       CDS       T10154                                 
Name
(RefSeq) coatomer subunit beta' (coPB2)
  KO
K17302  coatomer subunit beta'
Organism
vnx  Vairimorpha necatrix
Brite
KEGG Orthology (KO) [BR:vnx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vnx04131]
    VNE69_07043
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vnx04147]
    VNE69_07043
Membrane trafficking [BR:vnx04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    VNE69_07043
Exosome [BR:vnx04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   VNE69_07043
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st TPR_COPA_B Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Vps41 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SPT8 WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_NOL10_N WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F Beta-prop_LRRK2 Med31 Beta-prop_RIG_1st Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 90541799
NCBI-ProteinID: XP_065330119
UniProt: A0AAX4JDE1
LinkDB
Position
7:471851..474046
AA seq 731 aa
MKLQEQTLKKIRSVRIKAIECHSIKPLAILGLYNGYLQTWNTSTLLLINEVHVSDFPIRT
LALVEKNNCVLIGSDDGRIYVYELNNLQRISSFDAHADFIRKIIVNPQNTEFLTCSDDTT
IKLWEIGSIMKCVSVFTGHTHFVMDLVYYPKDNKQFLSCSLDGTIKLWNKESKSCIKTYK
GHKSGINTLSFCKDDLYFVSGSDDFSLKIWDINNGNCISTLKGHTNNIINVYSMNTFPYL
VSCSEDGTYRLWDTNTFENTEIINLNSGRIWQYKEHKNIILIGTDEELIFKKIKTGKSLY
DLKNNKLYFTSQNSVFSCKVDDIYNIKKLAELDFYPSELCASENAKFISVCDDKNFSIFS
SLGFRKKMSGHGNNLHFFDNEEFLILRDEYIEIYEKNEMIRSIKIYDIEKILLAQKYIYV
QRNDSLDVYTFEGIRIFTWNFKAFKAHVNSNILILELNNKIQIYKINDDIISAYLEQDIE
IDEVGIPDSFIFLGEFNVKIDSSCWLTTDNHDTMFMFNFESKGYYIFLRDDPYLYNFGPV
NGLMCGFINDKVLLLNNSQTTSSLSFLDLDLEFINFQSRIFNNEKCDCKESFRIKAISFL
ESLGKNNEALEICANDNQRFEILIKLGLLEEASALAVSPPMFDRLGHEFCKRSDLVNATE
CLYKSGNWRSLLFVDLLCNKKYLKEIAENSLENGEDNVAFIAFLKNKNYEKCGEILRESK
FYNFFKETYLQ
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgaaattacaagaacaaacactcaaaaaaataagaagtgtaagaataaaagccatagaa
tgtcattctataaaaccacttgcaatcttaggactttacaatggatacctccaaacttgg
aatacatcgacattacttttgattaatgaagtacatgtttcagatttcccaataagaact
ttggcactagttgaaaaaaataattgtgttttaattggatctgatgatggtcgaatttat
gtttatgaattgaataatttacaaaggattagttcgtttgatgctcatgcggattttata
agaaaaattatagtgaatcctcagaatacagagtttttaacttgtagtgatgacactact
ataaaattatgggagatagggtctattatgaaatgtgtttctgtatttactggtcataca
cattttgtaatggatcttgtttattatcctaaggataacaaacaatttctgtcttgttct
ttagatgggactatcaaattatggaataaagagtcgaaatcttgtattaaaacctacaaa
gggcataaaagtggaattaatacattgagtttctgtaaagatgatttgtattttgtaagt
ggatcagatgatttttctttaaagatctgggatattaataatggaaattgtatcagtacc
cttaaaggacacactaataatattataaatgtgtattctatgaatacatttccctatctt
gtctcctgttccgaggatggaacttatagattgtgggatacaaatacttttgagaataca
gaaattataaatttgaatagtggacgaatttggcaatataaagaacataagaatattatt
ttaatagggacagacgaagaattaatttttaaaaagattaaaacggggaaatctttgtat
gatttgaagaataataagttatattttacatctcagaattctgtcttcagttgtaaagtt
gatgatatttacaatattaagaaattggcagagttagatttttatccctcagaattatgt
gcctctgaaaatgcgaaatttatctcagtgtgcgatgataaaaatttttcgattttttct
tctttaggttttagaaagaagatgtctggacatggaaataatttgcatttttttgataat
gaagagtttttaatattaagagatgagtacattgagatttatgagaagaatgagatgatt
agatctattaagatttatgatattgagaagattttattagcccagaagtatatttatgta
cagagaaatgattctttagatgtttacacatttgaaggtattcggatttttacctggaat
tttaaggcttttaaagcacatgtaaattccaatattttaatattagaattaaataacaag
atccagatttataaaattaatgatgacatcatttctgcatatttagaacaagatattgag
attgatgaagttggaattcccgattcctttatttttttaggggagtttaatgttaagatt
gattcttcttgttggcttactacagataatcatgacacaatgtttatgtttaatttcgag
agtaaagggtactatattttccttagagatgatccttatttatataattttggaccagta
aatgggcttatgtgtggatttattaatgataaggttctattattaaataattctcagact
actagtagtctgagttttctagatttagatttagagtttattaatttccagagtcgcatt
ttcaataatgagaaatgtgactgtaaggagtcattcagaattaaggccatttctttcctt
gagtctttagggaagaataacgaggcccttgagatttgtgcgaatgataatcagagattt
gagatattaattaagcttggcctccttgaggaggcgtctgctttagcagtgtctcctccc
atgtttgacagacttggtcatgagttctgtaagagaagtgatcttgtcaatgcgacagag
tgtttatataaatctggtaattggaggtctttattatttgttgatttattgtgtaataag
aagtatttgaaagagatagcagagaattcccttgagaatggggaggataatgtggccttt
atagcctttttgaagaataaaaattatgagaaatgtggggagattttaagagagagtaag
ttttataatttctttaaggaaacatatcttcaataa

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