Vairimorpha necatrix: VNE69_07178
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Entry
VNE69_07178 CDS
T10154
Name
(RefSeq) cytoplasmic and nuclear polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
vnx Vairimorpha necatrix
Pathway
vnx03015
mRNA surveillance pathway
vnx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VNE69_07178
09123 Folding, sorting and degradation
03018 RNA degradation
VNE69_07178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnx03019
]
VNE69_07178
03041 Spliceosome [BR:
vnx03041
]
VNE69_07178
Messenger RNA biogenesis [BR:
vnx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
VNE69_07178
mRNA cycle factors
Stress granule specific factors
VNE69_07178
Spliceosome [BR:
vnx03041
]
Complex C
Other components
Complex C specific factors
VNE69_07178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_7
RRM_PARP14_3
RBD_DEAH11
RRM_RdRP1_2
MLLE
NifQ
Motif
Other DBs
NCBI-GeneID:
90541934
NCBI-ProteinID:
XP_065330257
UniProt:
A0AAX4JE67
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All DBs
Position
7:complement(897062..898588)
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AA seq
508 aa
AA seq
DB search
MDVKENIGEQNMSASTVYVGDLSPKTLESDLFRIFSTIGEVSKIRLKKRTEPLSSFAFVT
FSNQEDAERAIKEYNNFRLNKKAIRVLPCIDEKSKKEEANLIVKNLPSTFTNENLFDTFS
VFGSIISAKIATYADGKPKNYGFVQFDKKKSAKLAIKHCDGGKLDDKVIQVEVFDKEKRK
RQEDLASKEEAVKPEPKFTNCFIKNFPEKLEKSELETILSKYGNITSLCFPFKNGTTVSK
GFAFANFENHESALAAIEDLHGKQVFEPEEGPNAAKYEPFYIQKAQKKEEREEHLKKSFE
QQTLEGQHIKRNLYITNIPNFIEKDDIFEIFSEFGTIISLSIGVDAINEQKKYAYVCYET
SDEAFLAIEKGNEFFIDNNKLNVTYFKNKTERSKEKMMSSVSMNSTVPYIYSSPLKMSSN
TSFNYDMFSNISSKENINDKLFDLVLRSANTFRHQWEQLGVNTREEFAKKITNILSKKSN
EEILEMQTYSRILSEKISSSIEENKKKN
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaaagaaaacattggtgaacaaaatatgtcggcttcaactgtgtatgtagga
gatttatctcctaaaacattggaatcagatctatttagaatattctctactattggagag
gtatcaaaaattagactcaaaaaacgaactgagccactttcgtcatttgcatttgtaact
ttcagtaaccaagaagatgctgaaagggctattaaagaatataacaacttcagacttaat
aaaaaagcaataagagtgttaccatgtattgacgaaaaatctaaaaaagaggaagcaaat
ttgatagtaaaaaatttaccatcaacttttactaatgaaaatcttttcgatactttttca
gttttcgggtcgattatcagtgcgaagatcgcgacttacgctgatggaaaaccaaaaaat
tatggatttgtccaattcgataaaaaaaagtctgcgaaattggctataaaacattgtgat
ggtggaaaattggatgataaagttatacaagtagaagtatttgataaagaaaaaagaaaa
agacaagaagacttggcttccaaagaagaagcagtaaaaccagagcccaaattcacaaat
tgctttataaaaaattttccggaaaaattagagaaatcagaattggagacaattttgagt
aaatatggaaatattacgtcattatgtttcccatttaaaaatggtaccactgtttctaaa
ggatttgcattcgctaattttgaaaatcacgaatctgctttggccgccattgaagatttg
cacggtaaacaagtttttgaaccggaagaaggtccaaatgccgcgaaatacgagccattt
tacattcagaaagcacaaaaaaaggaagaaagggaagaacatttaaaaaagtcatttgaa
caacaaactttggaaggtcaacatataaaaagaaatttatatatcaccaatattcccaat
tttattgagaaagatgacatcttcgaaatatttagcgaatttggtacaataatttcactt
tctattggcgtggacgcgattaacgagcagaaaaaatacgcctatgtttgttacgaaacc
tctgacgaagctttcttggccattgaaaaaggcaacgagttttttattgacaacaataaa
ctaaacgtgacttattttaaaaataaaactgaaagatctaaagagaaaatgatgtcatca
gtaagtatgaattctactgttccctatatttacagttctccgcttaaaatgagcagtaac
acgtcttttaattatgacatgttttctaatatttcgtctaaagaaaatattaatgacaaa
ctttttgacttggtcttgagatcggcgaatactttcaggcatcaatgggaacaattaggc
gtgaatacgagagaagaattcgcgaaaaaaataactaatattttatctaaaaaatctaat
gaagaaattctagagatgcaaacttatagtagaattttatcagaaaagataagttcatct
atcgaagaaaataaaaagaaaaattaa
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