Vairimorpha necatrix: VNE69_08025
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Entry
VNE69_08025 CDS
T10154
Name
(RefSeq) ATP-dependent RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
vnx Vairimorpha necatrix
Pathway
vnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VNE69_08025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vnx03041
]
VNE69_08025
03009 Ribosome biogenesis [BR:
vnx03009
]
VNE69_08025
Enzymes [BR:
vnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VNE69_08025
Spliceosome [BR:
vnx03041
]
Complex A
U1 snRNP components
U1 related factors
VNE69_08025
Complex B
VNE69_08025
Ribosome biogenesis [BR:
vnx03009
]
Eukaryotic type
Pre-60S particles
Helicases
VNE69_08025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
DUF3318
Motif
Other DBs
NCBI-GeneID:
90542101
NCBI-ProteinID:
XP_065330412
UniProt:
A0AAX4JE70
LinkDB
All DBs
Position
8:complement(107946..109424)
Genome browser
AA seq
492 aa
AA seq
DB search
MFTNEKKEIEITLENVKLSATKKIVPIADTSKFNKTLSNNIKLKFENFNIIQQYTIPVIL
EGGDLICKAPTGSGKTLCYIIPIISKIIKNPDSKAVIICPVRELCEQIKEVCRELTSKIL
VTKSPEANDFYYRPKLSNQSIIVSAIYGQKRDMDDLNKANILIATPGRLIDNLTKKLLNF
NKLEIIVFDEADRLYDSTFKSQIDTIKSFITKDVQTCMFSATYPMEIQSIFDIIIKKDRT
CIDAEFELKTNVKQEIYNKFNRLDKICRELKGLSFVSNWRESLQVEKVIIFVERKFDCLK
LANDLSPLGFSSVTLHGDKNQFERNEALKKFKSSSSPILIATSVAARGIDIKDIKLVINY
DLPRTIDEYIHRIGRTGRAGEVGKSISFYDENTDYNISGELIKVLKDTDQKVPEFLVDKS
YKKNQKNFKIVKNRSDEKNKKSNNKPKQRNAEAPKRQDVNFKNDEDFISSMITNLNIKDD
KANSEDEELGAW
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaatgaaaaaaaagaaattgaaataacattagaaaatgtaaaactaagtgct
acaaagaaaatagttccaatagcagatacatcaaaatttaacaaaacgttatcaaataat
attaaattaaaatttgaaaattttaatataattcaacaatacactataccagtaatatta
gaaggaggagatctcatttgtaaagctcctactggatctggtaaaactctttgttatatt
ataccaataatatcaaaaataataaaaaatccagatagtaaagctgtgataatttgtcca
gttagagaactgtgtgaacagattaaagaagtctgtagagaattaacttctaaaatctta
gtaaccaaatctccagaagcaaatgatttttattataggcctaaattaagtaaccagtca
ataattgtatcggcaatttacgggcaaaaaagagacatggatgatttgaataaggcgaat
atcttgatagccacgccagggagattaattgacaatttgacgaaaaaattattgaatttt
aataaattggaaattatagtttttgatgaggcagataggttgtatgacagtacttttaaa
agtcaaattgatactataaaaagttttataactaaagatgtgcaaacttgcatgttttct
gctacttatccaatggaaattcagagtatttttgatataataataaaaaaagacagaact
tgtatagacgcagagttcgaattaaaaaccaacgtaaaacaagaaatttataataaattt
aacagattagataaaatttgcagagaattaaaaggtctatcttttgtaagtaactggaga
gagtcacttcaagtagaaaaagtcataattttcgtagaacgaaaatttgattgtctcaaa
ttggccaatgatttaagtcctttgggatttagttcagtcactttacacggagataaaaac
caatttgaaagaaatgaagctttaaaaaaatttaaatcttcttcatctccaattttgatt
gcgacaagcgttgccgctagaggaattgatattaaagatatcaaattagttataaattat
gatctacctaggacgatagatgaatacatacatcgaattggaagaactggtcgtgcaggg
gaagtaggtaaatctatttctttttatgacgaaaataccgattacaatatttctggagaa
ttgataaaagtcttaaaagacacggatcaaaaagtcccagaatttttagtagacaaaagt
tataaaaaaaaccaaaaaaattttaaaattgtgaaaaatcgatcagatgaaaaaaataaa
aaaagtaataacaaaccaaaacaaagaaatgcagaagcaccaaaaagacaagatgtcaat
ttcaaaaatgatgaagattttataagttctatgattacaaatctaaatatcaaagacgat
aaagctaattctgaagatgaagagttgggtgcatggtaa
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