Vairimorpha necatrix: VNE69_08184
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Entry
VNE69_08184 CDS
T10154
Name
(RefSeq) replication factor C subunit 4 (RFC4)
KO
K10755
replication factor C subunit 2/4
Organism
vnx Vairimorpha necatrix
Pathway
vnx03030
DNA replication
vnx03410
Base excision repair
vnx03420
Nucleotide excision repair
vnx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VNE69_08184
03410 Base excision repair
VNE69_08184
03420 Nucleotide excision repair
VNE69_08184
03430 Mismatch repair
VNE69_08184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnx03032
]
VNE69_08184
03036 Chromosome and associated proteins [BR:
vnx03036
]
VNE69_08184
03400 DNA repair and recombination proteins [BR:
vnx03400
]
VNE69_08184
DNA replication proteins [BR:
vnx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VNE69_08184
DNA Replication Termination Factors
ELG1-RFC complex
VNE69_08184
Chromosome and associated proteins [BR:
vnx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
VNE69_08184
DNA repair and recombination proteins [BR:
vnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VNE69_08184
Check point factors
HRAD17(Rad24)-RFC complex
VNE69_08184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
AAA_lid_RFC1
AAA_assoc_2
RCF1-5-like_lid
AAA_22
nSTAND3
RuvB_N
AAA_14
TniB
DEAD
AAA_24
ABC_tran
AAA_5
AAA_2
AAA_3
Viral_helicase1
Sigma54_activ_2
AAA_18
Rad17
Mg_chelatase
AAA_11
AAA_16
Hda_lid
DNAX_ATPase_lid
IstB_IS21
AAA_7
DNA_pol3_gamma3
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
90542260
NCBI-ProteinID:
XP_065330577
UniProt:
A0AAX4JEL7
LinkDB
All DBs
Position
8:1025618..1026535
Genome browser
AA seq
305 aa
AA seq
DB search
MDLLVNKYRPLNIESVIGNISTISTLSNIIKEKSMPHLLFTGPPGTGKTSSAKIFAFQLI
GSKDGILELNASDDRGIDTVRTQIKDFSMKKIQTVPFKIVILDECDSMTTAAQQAMRRIM
ETHSSDCKFILICNDFSKIFEPIQSRCAVLRFDKIDTLIIENRLREISKFENIKLTDEAV
NFIIDVSDGDMRQLLNILQTCINNPNLIDVQYIVKIIGIPSPKLVNEVVNLLLKKNIEEA
IEKFEKIWDEKYDAEDLISSFFRIAKNMENYEVVKAVGLTHLKIIKGNISKLIFYGMFYD
ILKVN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcttgtaaataaatacagaccactgaatattgaatcagttataggaaatatt
tccacaatatcaactttatcaaacataattaaagaaaaatcaatgcctcatcttttattc
acaggcccacccggcactggtaaaacttcctctgctaaaattttcgcttttcaattaatt
ggcagtaaagacggcattttagaattaaatgcttctgatgacagaggaatagacacagta
aggacacaaataaaagatttcagtatgaagaaaatccagacagtcccttttaagatagta
attttagatgaatgcgatagtatgacgactgccgctcaacaagctatgcgtcgtattatg
gagacacacagttcagattgcaaatttattttaatttgcaatgatttctcgaagatattt
gagccaatacaaagcagatgcgcagtcttaagatttgataaaattgacactttaatcata
gaaaatcggcttagagaaatttcgaaatttgaaaatataaaattgacagacgaagctgtc
aatttcataattgatgtttcagacggagacatgagacaattacttaatattttacagact
tgtataaataacccgaatttgattgatgttcaatatattgtcaagattataggaataccc
tctcctaaattagtaaatgaagtggtaaatttgttacttaaaaagaatattgaagaagct
atagagaaatttgagaagatttgggatgaaaaatatgacgcagaagatttgatttcgtct
ttttttagaattgctaaaaatatggaaaattatgaagtggtgaaggccgttggcctgacg
catttgaaaattatcaaagggaatataagcaaattgatattttatggtatgttttatgac
atcttaaaagttaattaa
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