Vairimorpha necatrix: VNE69_09128
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Entry
VNE69_09128 CDS
T10154
Name
(RefSeq) regulator of nonsense transcripts protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
vnx Vairimorpha necatrix
Pathway
vnx03013
Nucleocytoplasmic transport
vnx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VNE69_09128
03015 mRNA surveillance pathway
VNE69_09128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vnx03019
]
VNE69_09128
Enzymes [BR:
vnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VNE69_09128
5.6.2.5 RNA 5'-3' helicase
VNE69_09128
Messenger RNA biogenesis [BR:
vnx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
VNE69_09128
mRNA cycle factors
Common to processing body (P body) and stress granule
VNE69_09128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
UPF1_Zn_bind
AAA_19
AAA_30
ResIII
DEAD
UvrD-helicase
SLFN-g3_helicase
ATPase
PIF1
nSTAND3
PhoH
Helicase_RecD
A2L_zn_ribbon
SRP54
UPF1_1B_dom
Sigma54_activat
NPHP3_N
zf-UBP
AAA_5
AAA_22
AAA
Motif
Other DBs
NCBI-GeneID:
90542407
NCBI-ProteinID:
XP_065330720
UniProt:
A0AAX4JEY9
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All DBs
Position
9:join(803327..803579,803697..805798)
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AA seq
784 aa
AA seq
DB search
MKCTYCELPSNLVECSTCNKFFCNSRSSSSISHIIFHLVKTKHKSIIINNEDILCTKCNE
DNIFKLVKYDNIIYCKECSTTHTTIEERCLTILPSNTTNIQLSKSQMIEIEEKSSYLLPS
VKSRLDPLEYVNIFTTLIDAECQKEREIKEQMRQENVVIRWETMKYGYFYFYRSNTDLKI
NIGDEIKLTHKSGLCLTGYINNDNFSEELRFEVDQSGDYPRSGYIIEYIWRGVCYERMKW
ALNKLYNQYLRQQNYKVFKDENVFKDDNDKVCKNENDKVCKNDNVVVNDNINNTSNTNTT
NTSNTNTYNQLSSNSNSEDINLFEYLVRGGKENIKLNLEIDNPPNLPILNKYQELAVKAA
LSRKVTLIQGPPGTGKTLVSAAIVYNYIKKNKGPVLVVAPSNTAVDQLTLKIHKTGLKII
RVMSRRREYTQSDVNFLSLHENVREYLSNLDDILLDKYSVDKSNLDKSNTTKTNLVDKSN
TTNLVDNAKRKLLMKADVISCTCVTAGQKMFNKMKFTCVLVDEAVQSTEPLNLIPLVYGC
KKLILVGDHKQLGPTILSKKVAQAGFKQSMFERLISIGVSPYILNLQYRMHPDLCEWPSE
TFYNGELLSGNRLTYKYNINIPHNFFYACFGKEEVSASGTSFINPMEALYCESIIRHLFK
SGITENQIGVITPYEGQRSHILNRVFGSEPGNLEISNVDGFQGREKDFIIVSLVRSNQYQ
GIGFVGDKRRMNVTLTRAKHGLIIIGNPNTMMKHEIWKNLLEYYDKKGLILEGPLGDLRR
YAIL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcacttactgcgagttaccttcaaatttagtagaatgctccacatgtaacaaa
ttcttctgtaattccagatcctcatcttctatctctcacattatcttccacttagtaaaa
acaaagcacaaatctattattattaataatgaagatattctctgtactaaatgtaatgaa
gataatattttcaaattagtaaaatatgataatataatatattgtaaagagtgttctact
actcatactactatagaagaaagatgtcttactattttaccatcaaatactacaaatata
caattatctaaatctcaaatgatagaaatagaagaaaagtcttcttatttattaccatct
gttaaatctagacttgatcctttagaatatgttaatatatttactactttaatagatgca
gaatgtcaaaaagaaagagaaattaaagaacaaatgagacaagagaatgtagtgataaga
tgggagactatgaaatatggatatttttatttttatagatctaatacagatttaaagatt
aatataggagatgagataaaattgacacataaaagtggattatgtttaacagggtatata
aataatgataattttagtgaagaattaagatttgaagtagatcaaagtggagattatccg
cgaagtgggtatataatagaatatatatggagaggagtatgttatgaaaggatgaaatgg
gcactgaataaattatacaatcaatatctacgtcaacaaaattacaaagtatttaaagat
gagaatgtatttaaagatgataatgataaagtatgtaagaatgagaatgataaagtatgt
aagaatgataatgtagtagttaatgataatataaataatactagtaatactaatactact
aatactagtaatactaatacatataatcaattaagtagtaatagtaatagtgaagacata
aatttatttgaatatttagtaagagggggtaaagaaaatattaaattaaatttagaaata
gataatcctcccaatctccccattctgaataaatatcaagaattagcagtcaaggctgct
ctaagtagaaaagtgacactaatacaaggcccccctggtacggggaagacactagtctct
gctgctatagtatataattatattaagaagaataaaggcccagtcttagtagtagcccct
tctaatacagcagtagatcaattaactcttaagattcataagacaggacttaagataatc
cgagtgatgagtagaagaagggagtacacacaatcagatgtgaatttcttaagtctccat
gagaatgtacgggagtacctatctaatttagatgacattcttcttgataaatatagtgta
gacaaatctaatttagataaatcaaatacgactaagacaaacttagtagataaatcaaat
acaactaatttggtagataatgcaaagaggaaattattaatgaaggctgatgtcatttct
tgtacttgtgttactgctggtcagaaaatgtttaataaaatgaaatttacttgtgtttta
gtagatgaagcagtccagagtactgagcctctaaatcttattcctttagtctacgggtgt
aagaaacttattcttgtaggagatcataaacaattaggccctactatcttaagtaagaaa
gtagcccaggctggatttaaacagagtatgtttgagagattaatttctataggtgtctct
ccttatatcttaaatttacaatatagaatgcaccctgacttatgtgagtggccttctgag
acattttataatggggaattattaagtggtaatagacttacttataaatataatataaat
attcctcataacttcttctatgcttgttttggtaaagaagaagtcagtgcaagtggtact
agtttcataaatcctatggaggctttatattgtgagagtattataagacatctctttaaa
tctggtataactgagaatcaaataggagtaattactccttatgagggacagagatctcat
attctaaatagagtcttcgggtctgaaccagggaatctagagataagtaatgtagacggg
tttcaagggagagagaaggattttataatagtaagtctagtgagatctaatcagtaccaa
gggataggatttgtaggagataaaaggaggatgaatgtgacacttacaagggcgaagcat
gggcttattataatagggaatcctaatacaatgatgaaacatgaaatatggaagaattta
ttagaatattatgataagaaaggacttatacttgaggggccccttggggatttaaggaga
tatgcaatattataa
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