Vairimorpha necatrix: VNE69_11096
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Entry
VNE69_11096 CDS
T10154
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
vnx Vairimorpha necatrix
Pathway
vnx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VNE69_11096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vnx03400
]
VNE69_11096
DNA repair and recombination proteins [BR:
vnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VNE69_11096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
90542770
NCBI-ProteinID:
XP_065331075
UniProt:
A0AAX4JFV8
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Position
11:410804..412936
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AA seq
710 aa
AA seq
DB search
MKEESNFEVFRYENKENGYYVKPPYTKWIEGSSDKETKIQITDLETIIQNLLLTKNCKVE
EYKDGVLVKQGYPGNWMDFTDLCLDHRLPPSLCSVKISKSHVEICFIRTTESTFYTCSIE
DDDVYSNLYAVLSEINAFEIIYDDKNLVSLESTGIITHLCEKANSAIDLLKKFLKVEVAD
IKTYVRPNICIVDYNTLEALDIYSKEKCILDQFQCYTVQGKRLLLQFFKQPLRNKEEIEA
RLNIIEKIRMLDLEILREFPDILKITKKISKISLLEILKLHQVVGKIPNLLDKINYSSLQ
SDFYIPLTNINSRVIMEDIEKVIDIKKSQRNIVVFNTVQKNEGDLSLQIISELYKSLDKI
NAECNSEYRKLLDICDKIKYEEGDDNFRITRIEYKKAENALQRCNILIINILKSGVNFTT
KRMSELTLEKNNVKESINKETCHILNELRLKMKTYVNELEVLNYIVALLDVFHAIGKKSK
DFGYTRPTFINPKTNKDSNIVDDDVFIEIKGGIHPLLEDKDCISNDIYLNKKRLCVITGP
NMGGKSTYLKMIGVISILAQVGCYVPAKYARLPIFDGVYIRIGANDCTYKGSSTFMVEMK
DISRICRMSTEESLILIDELGRGTSEIDGISIAKAVKDYLHEKRCITLFATHFPELCDDR
SLNMKASFDQLILNYKIVEGICDTSWGLNVAKMVGFPESVIEDIEKGLEQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaaagcaactttgaagtattcagatatgaaaataaagagaatggttattat
gtgaaaccaccttacacaaaatggatagagggaagcagtgacaaagaaacaaaaatacag
atcacagatcttgagacaatcattcaaaatttattacttacaaaaaattgtaaagtcgaa
gaatataaagatggtgtcttagtaaaacaaggttacccaggaaattggatggactttaca
gatctttgtcttgaccacagactaccgccgtctttatgcagtgtaaaaatatcaaagagt
catgtggaaatttgttttattagaacaacggaatcaactttttatacatgttctatagaa
gatgatgacgtatacagcaatttatacgcagttttatcagaaatcaatgcatttgaaata
atttatgatgataaaaatcttgtatcattagaaagtacggggattataacacacttatgt
gaaaaggccaatagtgctatagatttattaaagaaatttctgaaggtagaagtagcagac
attaagacatatgttagaccaaatatatgtatagtagattataatacattggaggctctt
gacatttattccaaggagaaatgtatactcgatcaattccaatgttacaccgtccaaggc
aaaagattattattgcaatttttcaaacagcctttacgcaataaagaagaaatagaagca
cgcctaaatatcattgaaaaaatcagaatgctagatttagaaatattaagagagtttcca
gatattttaaaaattacgaaaaaaatatcaaagatttctcttttagaaatattgaaattg
caccaagtagttggtaaaataccgaatttattagataaaatcaattattcttctttacag
agtgatttttatattccgcttactaatattaattcgagagttattatggaagatattgaa
aaagtaatagacataaagaaatcccagagaaatattgtcgtatttaatacagtgcaaaaa
aacgagggagatctaagtttacaaataatttctgaactatacaaatctcttgataagatc
aatgcagaatgtaattctgaatatagaaaattattggatatctgtgataaaatcaaatat
gaagaaggagacgataatttcagaattacaagaatagaatataaaaaggcagaaaatgca
ttacaaagatgcaatattttaattattaatattttgaaaagtggtgtaaacttcacaacc
aagagaatgtcagaattgactttagaaaagaataatgtaaaggaaagtattaacaaagaa
acttgtcatatattaaatgagttgagattgaaaatgaagacatatgtgaatgagttggag
gtattgaattatatagtagccttattagatgtatttcatgccattggtaagaaaagtaaa
gattttggatacacacgaccaacattcataaatcctaagacgaacaaagattcaaatatt
gtcgacgatgacgtatttatagagattaaagggggtattcatccattactagaagataag
gattgtatatcaaatgatatttacctaaataaaaaaaggctgtgtgtcataacgggacct
aatatgggcgggaaaagtacatatcttaaaatgataggggttatttctatcctggctcaa
gttggctgttatgtccccgcgaaatatgctcgccttcccatttttgatggtgtttacata
agaattggagccaatgactgtacttataaaggatcttctacattcatggtagaaatgaag
gatatttctaggatatgtagaatgtccacagaagaatcattgattcttattgatgagctc
ggacgagggacttcagaaatagatggaattagtatagcaaaagcagtgaaagattatcta
cacgaaaagaggtgtataacattatttgctacccatttccccgaattgtgtgatgataga
tctttaaatatgaaagcttcattcgatcaattaattctaaattacaaaatagtggaagga
atttgcgatacatcctgggggttgaatgtggccaaaatggtaggatttccagagtcagtc
atcgaagatatagaaaaaggactagagcaatga
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