Vairimorpha necatrix: VNE69_12025
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Entry
VNE69_12025 CDS
T10154
Name
(RefSeq) replication factor C subunit 1 (RFC1)
KO
K10754
replication factor C subunit 1
Organism
vnx Vairimorpha necatrix
Pathway
vnx03030
DNA replication
vnx03410
Base excision repair
vnx03420
Nucleotide excision repair
vnx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vnx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VNE69_12025
03410 Base excision repair
VNE69_12025
03420 Nucleotide excision repair
VNE69_12025
03430 Mismatch repair
VNE69_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vnx03032
]
VNE69_12025
03400 DNA repair and recombination proteins [BR:
vnx03400
]
VNE69_12025
DNA replication proteins [BR:
vnx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VNE69_12025
DNA repair and recombination proteins [BR:
vnx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VNE69_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
RuvB_N
AAA_14
RNA_helicase
NTPase_1
DUF815
PH_NF1
nSTAND3
AAA_17
AAA_16
AAA_18
AAA_6
PTCB-BRCT
AAA_33
BRCT_2
AAA_22
AAA_19
AAA_assoc_2
AAA_5
AAA_3
Motif
Other DBs
NCBI-GeneID:
90542887
NCBI-ProteinID:
XP_065331185
UniProt:
A0AAX4JG98
LinkDB
All DBs
Position
12:101378..103120
Genome browser
AA seq
580 aa
AA seq
DB search
MENFFKGKTFVFTGELTMDREYAKSKVILLGGRVTTAPSGKTDFLIVGADPGPLKLKKAR
ELGIQIIYEKEFTKNLEEGEKAYDKSIDINEHYGGMVIEENQISSDFDETSVFDTFGENK
PTKPSKFQEMWSEKYRPKKRSEIVGNQTVLSSLEDFLKGKSNYKGALLSGSPGVGKTTAV
HVLCKELGLKLIEFNASDVRNKNLLLKKLKGLTNTKGISKNMKLQKKVILMDEVDGMTSD
RGGLLELNTLIKNSEIPFVCICNDRNNLKIRTLANNCLDLKFRRLDARQILPRIKDILKR
ENKVIGDNILNEIVLVSHGDIRYILNSIQRICLNDKIKLTEALDLTKKTILKNIFDIAQE
CFHKKSINEKTNLYFEDYSLVPLFISENYMKMNFRNMKDFLESADSISNGDVVEKLIRGS
TQEWSLAPLHGFFTVALPTRNKTLSKRIDFPGWLGQNSRYLKYKRNLKDLCLHTFRKIQT
GLESFRLYESNLLFTNFISSLKKDKVKEALDLVVEYDLVKEDMINLSEIVTDGQVLYKQI
KTKTKSDFTRQYNKLRRQLPYNNEEVKKAKEVNEESNEEY
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactttttcaaaggaaaaacatttgtattcactggtgaattgactatggacagg
gaatatgcaaaatcaaaagtcatcctcttaggtgggagagttacaaccgcaccaagtggg
aaaactgacttcttaattgtaggagcagatcctggtcctttgaaattgaaaaaagcaaga
gaactgggtatacaaattatttatgaaaaggaatttactaaaaatctggaagaaggagaa
aaggcttatgataagtcaatagatattaatgaacattatggtggaatggtaatagaagaa
aatcagattagttctgattttgatgagactagcgtgttcgacaccttcggtgagaacaaa
ccaacgaagccttctaaattccaggaaatgtggtctgaaaaatacagacccaagaagaga
tcagagatagtggggaatcagactgtcttgtctagtcttgaagatttcttaaaaggaaag
agtaattacaaaggggcacttcttagtggatctcctggagtagggaaaactacagcagtc
catgttttatgtaaagaactaggcctgaaattaatagaattcaatgcgagtgatgttcgt
aataaaaatttactacttaaaaaacttaaagggttgacaaatactaaaggaatttctaag
aatatgaaattacagaagaaagttattcttatggacgaagtagacgggatgacgagtgac
agaggaggcctattagagcttaatacacttattaagaatagtgagataccctttgtttgt
atttgtaatgatagaaataatctaaaaatcaggaccctagcgaataattgtctggatttg
aaattcaggcgacttgatgctaggcagattttaccaagaataaaagatattttaaagaga
gaaaataaggtcataggagataatattctgaatgagattgtcttagtaagtcatggagac
ataagatacattctaaattccatacagagaatatgccttaatgataaaatcaagcttaca
gaagccttagatttaactaagaaaactattctaaagaatattttcgatatagcgcaagaa
tgtttccataagaaatctataaatgaaaagacaaatttatattttgaggattattccttg
gttcctttatttatatctgagaattatatgaagatgaattttagaaatatgaaagatttc
ttagaatcagcagattctatttctaatggagacgtagtcgagaaattaatacgaggcagt
acacaagagtggagtctcgctccactccatggatttttcactgtagctttgcctacaaga
aacaagaccctgtctaagcgcattgatttcccagggtggttaggacaaaattcgagatat
ttgaaatataaaagaaatctaaaagatttgtgtctacacacattcaggaaaattcaaaca
ggcttagagtccttcagactttacgagtctaatttattatttacaaattttatctcttcc
ttgaagaaagataaagttaaagaagccttagatctagtagtagaatatgatttagtcaag
gaagatatgattaatttatcagagatagtaacagacggacaggtattgtacaaacaaatc
aaaactaagacaaagtctgattttacaagacaatataataaattaaggagacagctccct
tataataatgaagaagtcaagaaagccaaagaggtaaacgaggaatcaaatgaagaatat
taa
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