Candidatus Vesicomyosocius okutanii: COSY_0288
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Entry
COSY_0288 CDS
T00530
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A GyrA
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vok
Candidatus Vesicomyosocius okutanii
Brite
KEGG Orthology (KO) [BR:
vok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vok03032
]
COSY_0288 (gyrA)
03400 DNA repair and recombination proteins [BR:
vok03400
]
COSY_0288 (gyrA)
Enzymes [BR:
vok01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
COSY_0288 (gyrA)
DNA replication proteins [BR:
vok03032
]
Prokaryotic type
DNA Topoisomerases
COSY_0288 (gyrA)
DNA repair and recombination proteins [BR:
vok03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COSY_0288 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
BAF61417
UniProt:
A5CXA3
LinkDB
All DBs
Position
288802..291387
Genome browser
AA seq
861 aa
AA seq
DB search
MSKYTENSTNFESNFPIVTIESEMRNSYLEYAMSVIVGRALPDVRDGLKPVHRRVLYAMD
VLGNDYNKSYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQPFSMRNILIDGQGNFGSVD
GDSAAAMRYTEIRMAKLSHELLQDLEKDTVDFVDNYDGSESEPSVLPARVPNLLANGSSG
IAVGMATNIPPHNLNEVIEACLKTIENEDITIDELLEIMPGPDFPTAGIINGTSGIRQAY
ETGKGKIYLRCVSHIEGEEKRSIIVTELPYQVNKAKLIGKIAELVKDKRIDGITGLRDES
DKDGMSMVIELRRGEVPEVILNNLYKLTEMQTVFGINMVAIDKGIPKLMTLKDILEAFIA
HRRDVVTRRSIFDLNKARNRVHLLEGLSVALYNIDNIVELIKSAPSSTDARSILIAKTWR
SSVIIELVGNRDMAMFKPENLPKELGLQMSGDYQLSQKQVQAILDLKLHRLTGFEKDKIF
DEFNELLERIKYLLDILQTPERLMQVICEELIDIQSNYGNARMTQILEHNIDLTLEDLIA
QEERVVTLSHGGYVKAQSLSDYQAQCRGGKGKSATKVKDEDFVDQLFIANSHDIVLCFSS
FGKVYWLKVYDLPMASRISRGKPIINLLPLEKKEIINAILPILKFDENHFVFMATSSGTC
KKTALTNFSKPRKGGIIAIELRNNDQLIGVEITSGEHDIMLFSANGKSIRFKESDVRIVG
RTAIGVRGIKLVDGDKVVSLIVTNQDSPVLTATEKGFGKRTHLNEYRVQSRGGSGVISIK
TSDRNGKIIGAIQVTNEDEMMLISNKGILVRARAADVSIIGRNTQGVILINISKDEKLVS
IAKVVETEDDKSESKSKNYVK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtatactgagaattccactaattttgagtcaaatttcccaatagttactatt
gagagcgagatgcgtaactcttatctggaatacgcaatgagtgttattgttgggcgtgca
ttacctgacgtccgagatggacttaaaccggttcatcgtcgtgtactttacgctatggat
gtattgggtaatgactataataaatcttataagaaatcagctcgtattgttggtgatgtg
attggtaagtatcatccacatggtgatactgctgtgtatgatactattgtgcgtatggca
caaccattttcaatgcgtaatattttaattgatggtcagggtaactttggatcagttgat
ggtgattcagctgctgctatgcgttatacagaaattcgtatggctaaactttctcatgag
ttattgcaagatttagaaaaagatacggttgattttgttgataattatgatgggtcagag
tcagagccttcagtgctgccagcacgtgtacctaaccttttggctaatggttcatcaggt
attgcagtagggatggcaactaatataccgcctcataatctaaatgaggtgattgaagct
tgtttaaaaactattgaaaatgaagatattactattgacgagttattagaaataatgcca
ggtccagattttccaacggcaggtattattaatggtacaagtggtattcgtcaggcttat
gaaactggtaaaggtaaaatttacttacgctgtgtatctcatattgaaggagaagagaaa
cgaagtattattgtgactgagttaccttaccaggttaacaaagccaagttaattgggaaa
attgcagaacttgttaaagataagcgtattgatggcattactggacttcgtgatgagtct
gataaagatggaatgagtatggtgattgaattacgtcgtggtgaagtaccagaagtaata
cttaataatttgtataaattaactgaaatgcaaaccgtatttggtattaatatggtggca
attgacaagggcatacccaagttgatgactttaaaggatattttagaagcatttattgca
cataggcgtgatgtggtgactcgtcgttctatttttgatttaaataaagccagaaatcgt
gtacatttattagaaggtttgtcggttgcattatacaatattgacaacattgttgaattg
ataaagtctgcaccaagttcaacagatgcaagatcaatattgatagccaaaacttggcga
agttcagtgattatagaattagttggtaatcgtgatatggcaatgtttaagccagaaaat
ttaccaaaagagttgggtttacaaatgagcggtgattatcaattatcacaaaaacaagta
caagctattttagatttaaaacttcatcgtttaacagggtttgaaaaagataaaattttt
gatgaatttaatgaattgttagagcgtattaaatatttactagatattttacaaactcct
gaaagacttatgcaagttatttgtgaagaattaatagatattcaaagtaactatggtaat
gctcgtatgacacaaatcttagaacataatattgacttgacacttgaagatttaattgcc
caagaagaacgtgtggttactttatcccatggtggttatgtgaaagcgcaatctttaagt
gattatcaggcacaatgtcgtggaggtaagggtaaatcagctactaaagtaaaagatgaa
gattttgttgatcagctattcattgctaattctcatgatatagttttgtgcttttcatct
tttggcaaggtatactggcttaaggtttatgatttgccaatggcatcgcgtatttcgcgt
ggtaagccgattattaatttattaccactagaaaaaaaagaaataattaatgctattttg
ccaatcttaaaatttgatgagaatcattttgtctttatggcaaccagtagtggtacctgt
aagaaaacagcacttactaatttctcaaaaccgcgtaaaggcggtattattgctattgaa
ttaagaaataatgaccaacttattggtgtagaaattacctcaggtgaacatgatatcatg
ctattctcagctaatggaaaatctattcgatttaaagaatcagatgtacgtattgtaggg
cggactgctatcggtgtacgaggtattaaattagtagatggtgataaagtagtatctctt
attgttactaatcaagatagtccagttctgacagcaactgaaaaaggttttggtaaacgt
acgcatcttaatgaatatcgtgttcaatcaagaggtggttcaggtgttatttctattaaa
acttcagatagaaatggtaaaattattggagctattcaagtaaccaatgaagatgaaatg
atgttaatttctaacaaaggtattttggttcgtgctagagcagctgatgtttctattatt
ggtcgtaacactcaaggcgtgatattgattaatatttctaaagatgaaaaattagtctct
attgcaaaggttgttgaaacagaagatgataaatctgaatctaaaagtaaaaattacgta
aaataa
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