Candidatus Vesicomyidisocius calyptogenae: COSY_0426
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Entry
COSY_0426 CDS
T00530
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vok
Candidatus Vesicomyidisocius calyptogenae
Pathway
vok03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COSY_0426 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vok03019
]
COSY_0426 (pnp)
03016 Transfer RNA biogenesis [BR:
vok03016
]
COSY_0426 (pnp)
Enzymes [BR:
vok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
COSY_0426 (pnp)
Messenger RNA biogenesis [BR:
vok03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
COSY_0426 (pnp)
Transfer RNA biogenesis [BR:
vok03016
]
Prokaryotic type
tRNA degradation factors
COSY_0426 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
BAF61545
UniProt:
A5CWW8
LinkDB
All DBs
Position
complement(437037..439124)
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AA seq
695 aa
AA seq
DB search
MNIKTKSFTMGKHIVTLETGRIARQAHGAVLASMDDTQVLVTVVSSKETRPGQDFFPLSV
DYIEKTYSTGKIPGSFLKREARPSEKETLTSRLIDRTIRPLFPNGFMNEIQVLITVVSAN
SEVNPDIISMLGVSAALSISGVPFSRPIGGSRVGYSNGEYILNPTYIELTNSDLDMVVAG
TDEAVLMVESEANELSEEIMLGAVVYAHEQYQVAITNIAEFTTEVGMQKWDWIAPITNEV
LLSDIKSKFGKEINKAYQIKEKLDRHAKIDNIRMAAIEALENENENGNSAEEVSKYFKEV
EKSTVRERILNNDSRIDGRNNETVRELKIETGILKNTHGSALFTRGETQALVVTTLGPKS
DAQLIEKLESPERQNNYFLLHYNFPPYCVGETGRLATIKRREIGHGHLARRGITACLPSI
EEFPYTVRVVSEITESNGSSSMASVCGSSLSLMDAGVPIKAPIAGIAMGLVKENDRFTVL
TDILGDEDHLGDMDFKVAGTSRGVNALQMDIKIQSITHEIMEIALKQAKEARLNILGQMN
QVICEPNTSNKNTPKTTIIKIKTDKIRDLIGRGGETIKGIISTSCASIDVDDSGNVNIFS
NNQKSFDTAVQMVKDVTAIPEVNKVYTGKVVKIVEFGAFINIMPNQDGLLHISEISHERV
EKVKDHIREGDKIDVKVIGLDRGRIKLSRKVLLEK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaaaacaaaaagcttcactatgggtaaacacatagtgacattagaaacaggg
cgtattgctaggcaagcacatggcgcagtactggcaagtatggatgatacgcaagtattg
gtaaccgttgttagctctaaagagacacggcctggacaagatttttttcctctatctgtt
gattatattgaaaaaacttactcaaccggaaaaattcctggcagttttctaaaacgtgaa
gcaaggcctagtgaaaaagaaactctaacatctagattaattgatcgcactattcgccca
ctatttccaaatggtttcatgaatgagatacaagtacttattaccgttgtttctgccaat
tctgaggttaatccagacattatttcaatgttaggtgtatctgctgcactaagtatttct
ggtgttccgtttagtagaccaattggcggttctcgtgttggctattctaatggtgaatat
attcttaacccaacttatattgagttgactaattcagatttggacatggtggttgcaggc
actgatgaagcagtattaatggtagaatcagaagctaatgaactttctgaagaaattatg
ttaggtgcagttgtgtatgcacatgaacaataccaagttgccattaccaatattgctgaa
tttaccactgaagtgggtatgcaaaaatgggactggatagcacctataactaatgaagtt
ttattaagtgatatcaaatcaaaatttggcaaagaaattaacaaagcctaccaaataaag
gaaaaacttgaccgtcatgccaaaattgataacatcagaatggctgcaattgaagcattg
gaaaatgaaaatgaaaatggaaattctgctgaagaagttagcaaatactttaaagaagtt
gaaaaatcaactgtacgtgagcgcatcttaaataatgattctcgtattgatggtcgtaat
aatgaaactgttcgtgagttaaagattgaaacaggtattctaaaaaatacgcatggctct
gctttatttactcgtggtgaaacacaagcattagttgtaaccactttaggccctaagagt
gatgctcagttaattgaaaaattagaatctcccgagcgtcaaaataattacttcttgtta
cattacaacttcccgccatattgtgtgggagaaactggtcgcttagctacaatcaaacgt
cgtgaaattggtcatggtcatctagcacgccgtggtatcactgcttgcttgccttcaatt
gaagaattcccatacacagtacgtgtagtctcagaaattaccgaatccaacggttctagt
tctatggctagtgtttgcggctcatcattatcattgatggatgcaggtgtaccaataaaa
gcaccaatagcaggcattgctatgggtttagttaaagaaaatgatagatttaccgtattg
actgatattttaggtgatgaagatcacttaggtgatatggattttaaagtagcagggaca
tcacgtggagtaaatgcattacaaatggacattaaaatccagagcattacccatgaaatt
atggaaatcgctctaaaacaagctaaagaggcaagattgaatattttaggtcaaatgaac
caagttatttgtgaacctaatacgtcaaacaaaaatacacctaaaactaccattattaaa
attaaaactgataagattcgtgatttaatcggcagaggtggagaaaccattaaaggtatc
atctcaacttcttgtgctagtattgatgtagatgatagtggtaatgttaatattttttcc
aataaccaaaaatcctttgatacagcagtgcaaatggtcaaagatgtgaccgctatacct
gaagtgaataaagtttatacaggtaaagttgttaaaattgttgagtttggtgcttttatt
aatatcatgcctaaccaagatggtttactacatatttctgaaatttctcatgaacgtgtt
gaaaaagtaaaagatcatattagagaaggtgataaaattgatgtaaaagttataggttta
gacagaggtcgtattaaattatctcgtaaagttttattagaaaaataa
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