Candidatus Vesicomyidisocius calyptogenae: COSY_0514
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Entry
COSY_0514 CDS
T00530
Symbol
rpoH
Name
(GenBank) DNA-directed RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
vok
Candidatus Vesicomyidisocius calyptogenae
Brite
KEGG Orthology (KO) [BR:
vok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vok03021
]
COSY_0514 (rpoH)
Transcription machinery [BR:
vok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COSY_0514 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UCR_14kD
SpoIIID
SWC7
PRTase_2
Cmr7A
Sua5_C
Motif
Other DBs
NCBI-ProteinID:
BAF61633
UniProt:
A5CWP4
LinkDB
All DBs
Position
540511..541344
Genome browser
AA seq
277 aa
AA seq
DB search
MNQEFALSSTQKTSSLEVQKYPPILSSEEEHELAVQLYENHNLSAARKLVLSHMRFVAFI
AHSYKGYGLEQADLVQEGTIGLMKAVKRFNPHRNVRLASFAVYWIRAEIHEFIFKNWKIV
KVATTKAQRKLFFKLKQAKAHIYNSLNEEQADKIAKDLGVRRKDVLEMESRLQFSDVTFE
VFDEEDSHAPEQYLTNENIQTPEQLLLTDDSKKTQQQRLYKALSSLDERSLDILQSRYLK
EEKTTLYTLADKYSISKERVRQLETKAMQKLKSNLQE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaatttgcattatcatctactcaaaaaacttcaagtttagaggttcaaaaa
tacccacctattttaagcagtgaggaagaacatgaattagcagttcaattatatgaaaac
cataatttaagtgcagctagaaaattagtattatcacatatgcgttttgtagcttttatt
gctcatagttataaaggttatggccttgaacaagctgatcttgtacaggaaggtactatt
ggattaatgaaggcggttaaacgttttaatccacatagaaatgtacgtcttgcctcattc
gcagtgtattggattcgcgctgaaattcatgaatttattttcaaaaattggaaaatagtt
aaagttgctacaacgaaagcacagcgtaaactattttttaaacttaaacaagctaaagca
catatttacaattcattaaacgaagaacaagcagataaaattgccaaagatttgggcgta
cgtcgtaaagatgtcttagaaatggaatcacgcttacaatttagcgatgtcacatttgaa
gtgtttgatgaggaggattctcatgcaccagaacaatatttaaccaatgaaaatatccaa
acacctgaacaattgttgttaacagacgattcaaaaaaaacccaacaacaacgactttat
aaggctttatcatcgctagatgaaagaagtttggatattttacaatccagatacttgaaa
gaagaaaaaacaaccctatatactttagcagacaagtatagcatttcaaaagaaagagtg
cgtcaacttgagactaaagccatgcaaaagcttaaatcaaacttacaagagtaa
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