Candidatus Vesicomyidisocius calyptogenae: COSY_0557
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Entry
COSY_0557 CDS
T00530
Symbol
ffh
Name
(GenBank) signal recognition particle, subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vok
Candidatus Vesicomyidisocius calyptogenae
Pathway
vok02024
Quorum sensing
vok03060
Protein export
vok03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vok00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
COSY_0557 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
COSY_0557 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
COSY_0557 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vok02044
]
COSY_0557 (ffh)
Enzymes [BR:
vok01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
COSY_0557 (ffh)
Secretion system [BR:
vok02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
COSY_0557 (ffh)
Eukaryotic Sec-SRP protein
COSY_0557 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
Zeta_toxin
AAA_31
SLFN-g3_helicase
DnaB_C
ArsA_ATPase
AAA_14
T2SSE
ABC_tran
AAA_24
KTI12
ResIII
AAA_16
FtsK_SpoIIIE
AAA_33
DUF4986
AAA_30
DO-GTPase1
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAF61674
UniProt:
A5CWJ2
LinkDB
All DBs
Position
complement(584810..586210)
Genome browser
AA seq
466 aa
AA seq
DB search
MFDNLTELLQNSFKVLQGKNKLSESNVKEAIRKVRRALLEADVALEVIKVFLDKVQIKAL
GLKVGQGLTPSQTFIKLVETELTKIIGGKVESLDLKTQPPAIIMVAGLQGAGKTTSVAKI
AFYLKQRENKKVLVVSADVYRPAAIEQLEVLSKQIEVDFFPSTINDKPSDIVANAKRYAQ
KQFFDVLLVDTAGRLHIDEQMMNEIKILQKKVDPIETLFVIDSMTGQDAVHTAKVFSNAL
PLTGVILTKTDGDARGGAALSVRHIIGKPIKFLGVGEKIDALELFHPERVVSRLLGMGDV
LSLVEEISRKVNHKKVQKSFQKMTKGQFDLSDMRYQLLQTEKMGGIEAMMNKLPGLGKIP
QNVKNQIVNGAEIKKMVAIINSMTPKERSYISLIKGSRKARIANGSGTNIQAVNKLIKQF
EKMQKQMKKVSGGKMQKMMAKMVDSDGMPDFSKIKKSNISSNKFPF
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgagctcctacaaaacagttttaaagttttacaaggaaagaat
aaactatctgaatccaatgttaaagaggcgattcgtaaagtacgtcgtgcactacttgag
gcagatgttgcacttgaagtaatcaaggtatttttagataaagtgcaaatcaaggcatta
ggacttaaggttggacaaggactaacaccatcacaaacatttattaagttggttgaaact
gaattaactaagattattggaggtaaagtagaatcgcttgatttaaaaactcaaccgcca
gctattatcatggtagcaggcttacaaggtgcgggtaaaactacttcagtcgctaagatt
gcattttatttaaaacagcgtgaaaacaaaaaagtattagtagttagtgctgatgtttat
cgtcctgctgctattgagcagttagaagtattatccaaacaaattgaggtagattttttc
ccatcaacaattaatgataaaccttcagatattgtggctaacgctaaaagatatgcacaa
aaacagttttttgatgttttattagttgatactgcaggtcgtttgcatatagatgagcaa
atgatgaatgaaattaaaatcttgcagaaaaaagtagatccaattgaaactttatttgtg
atcgattctatgacgggccaggacgcggtacatactgctaaagtgttttctaacgcatta
ccattgacaggtgtgattcttactaaaactgatggcgacgctagggggggagcagcatta
tctgtacgtcatattatcggcaaaccaattaaatttttaggtgttggtgagaaaattgat
gcactggagctgttccatccagagcgcgtagtttctcgtttacttggtatgggagatgtg
ttatcgttagtagaagagatttcacgtaaagttaatcataaaaaagtgcaaaagtctttt
cagaaaatgaccaaaggtcaatttgatttatctgatatgcgttatcaacttttgcaaacg
gaaaaaatgggtggtatagaagcgatgatgaataaacttccaggtttaggtaaaattccc
caaaatgttaaaaatcaaatagtgaacggggctgaaatcaagaaaatggttgctatcatt
aattctatgacacctaaagagcgtagttatattagtttaattaaaggttcacgtaaggcg
cgtattgctaatggttctggtacgaatattcaagcagtcaacaaactaattaaacagttt
gaaaaaatgcaaaaacaaatgaaaaaggtgagtggtggaaagatgcaaaaaatgatggct
aaaatggtagatagtgatggcatgcctgatttttctaaaataaaaaaatctaatattagt
agtaataagtttcctttttag
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