Candidatus Vesicomyidisocius calyptogenae: COSY_0695
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Entry
COSY_0695 CDS
T00530
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vok
Candidatus Vesicomyidisocius calyptogenae
Pathway
vok03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COSY_0695 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vok03400
]
COSY_0695 (xseA)
Enzymes [BR:
vok01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
COSY_0695 (xseA)
DNA repair and recombination proteins [BR:
vok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
COSY_0695 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
HH_AprE
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
BAF61807
UniProt:
A5CW49
LinkDB
All DBs
Position
724988..726388
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AA seq
466 aa
AA seq
DB search
MFNIDEVYTISSFLSVCNKTIENNIPTCWLQGEISNLTRPASGHWYFSLKDNTVQVRCAL
FRFNQRYIKFSPKNGIEVLVRVVPTLYEARGNFQLVIQQIEQIGIGNLNLAFKQLKKDLD
NEGLFDNIHKKPLPNTINTIGVISSSTGAVIQDIIKVLNNRYPFVKILLFDSIVQGQDSI
KKLTNALNIADQSGKCDVIIIARGGGSLEDLWAFNEEILARAIFNAKTPIISAIGHETDT
TIADLVSDIRAPTPSFAAMLVTSNRLELLSNTNKLYTQLHQSYRQTLHYYQSRLNQLKLK
ISNPNKQIDYLNQKLDYLSINLTTRKESIFTLNNAKLNSLFTTLKQHSPIKTIKHAKSLN
QMSLNQLKYQIKQIINTNNNMLYLATERLQKIIMALTNKHKARLSIQANSLHYLSPLNIL
ARGFSITSDTKNQVLSSVTNIKINQTIITQLDNGALYSNIEKIEKN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatattgatgaggtttacacaatctctagttttctatctgtctgcaataaaacc
attgaaaataatattcctacttgctggctacaaggagaaatatctaatttaacacgacca
gcatcaggtcattggtatttttctctcaaggataatacagttcaggtgcgttgcgcttta
tttcggttcaatcaacgttatattaagtttagccctaaaaatggaatagaagttttagtt
cgtgttgtacctactttatacgaagctcgaggtaattttcaactcgtcatccaacaaatt
gaacaaataggtattggcaatttaaatcttgcatttaaacaattaaaaaaagaccttgat
aatgaaggtttgtttgataatatccataaaaaaccattacctaatactattaacaccatt
ggtgttatttcttcatccacaggtgcggttattcaagacattattaaagtattgaataac
cgctatccatttgttaaaattttgttatttgactcaatagttcaaggtcaagattcaata
aaaaaacttacaaacgccttgaatatagctgaccaatctggcaaatgtgacgttattatt
attgccagaggtgggggttcattagaagacttgtgggcatttaatgaagagatattagca
agagcaatctttaacgcaaaaaccccaattatcagtgcaattggtcatgaaactgacact
acaattgctgatcttgtttctgatattcgtgcacctacaccaagttttgctgccatgtta
gttacgtctaaccgattagaattgctctccaataccaataagttatacacgcaactacat
caatcttatcgacaaaccttacattattaccaatctcgtcttaatcaacttaaattaaaa
atatcaaacccaaataaacaaattgattatttaaatcaaaaacttgattatttaagtatt
aatcttactactcgtaaagaatctatattcactctaaataatgctaaacttaattcgctt
ttcaccaccttaaagcaacactctcctattaaaactattaaacacgctaaatctttgaat
caaatgtctttgaatcaacttaaataccaaattaagcaaataattaacaccaataataat
atgctatatttagcaactgaaaggcttcaaaagataattatggctctaactaataaacat
aaagcaagattatctattcaagccaactcacttcattacttgtcaccacttaatatactt
gcacgagggtttagtattactagtgatactaaaaatcaagtattatcatcagtaactaat
attaaaatcaatcaaactattataactcaattagataatggagcactatactctaacatt
gaaaaaattgaaaagaattaa
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