Candidatus Vesicomyidisocius calyptogenae: COSY_0864
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Entry
COSY_0864 CDS
T00530
Symbol
lpdA
Name
(GenBank) pyruvate dehydrogenase complex E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vok
Candidatus Vesicomyidisocius calyptogenae
Pathway
vok00010
Glycolysis / Gluconeogenesis
vok00020
Citrate cycle (TCA cycle)
vok00260
Glycine, serine and threonine metabolism
vok00280
Valine, leucine and isoleucine degradation
vok00310
Lysine degradation
vok00620
Pyruvate metabolism
vok00630
Glyoxylate and dicarboxylate metabolism
vok00640
Propanoate metabolism
vok00670
One carbon pool by folate
vok00785
Lipoic acid metabolism
vok01100
Metabolic pathways
vok01110
Biosynthesis of secondary metabolites
vok01120
Microbial metabolism in diverse environments
vok01200
Carbon metabolism
vok01210
2-Oxocarboxylic acid metabolism
vok01240
Biosynthesis of cofactors
Module
vok_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vok00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
COSY_0864 (lpdA)
00020 Citrate cycle (TCA cycle)
COSY_0864 (lpdA)
00620 Pyruvate metabolism
COSY_0864 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
COSY_0864 (lpdA)
00640 Propanoate metabolism
COSY_0864 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
COSY_0864 (lpdA)
00280 Valine, leucine and isoleucine degradation
COSY_0864 (lpdA)
00310 Lysine degradation
COSY_0864 (lpdA)
00380 Tryptophan metabolism
COSY_0864 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
COSY_0864 (lpdA)
00670 One carbon pool by folate
COSY_0864 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vok04147
]
COSY_0864 (lpdA)
Enzymes [BR:
vok01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
COSY_0864 (lpdA)
Exosome [BR:
vok04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
COSY_0864 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_oxidored
GIDA
HI0933_like
FAD_binding_2
FAD_binding_3
DAO
AlaDh_PNT_C
Thi4
UDPG_MGDP_dh_N
3HCDH_N
Trp_halogenase
Orthopox_35kD
Motif
Other DBs
NCBI-ProteinID:
BAF61969
UniProt:
A5CVP2
LinkDB
All DBs
Position
896881..898287
Genome browser
AA seq
468 aa
AA seq
DB search
MIKTQIVIIGSGPGGYTAAFRLADLGKQVTLIERYNALGGVCLNVGCIPSKALLHTAQII
NEAKDASHVGVTFNEPLISINGIRTNKDNIVTKLTNGIKTLAKARKINVITGYGRFISAN
QITIENSDDIIEFEQCIIATGSQVTKIPTLPFDDARVMSSTDALNLSNIPKRLLVVGGGI
IGLEMATVYNALGSEITVVELSDQLITSADKDIINPLLRRIKKQYANIFLNTKITKIEAL
KEGIKVRFEGKNTPKFDTFDKILVAIGRTPNGRLIDCEKAGVEINDWGFIPVNKQMKTNV
NNIYAIGDIIGQPMLAHKAIHEAKIAAEVICGYKSGFNALTIPSIAYTDPEIAWTGKTEK
ELKAEGISYEKGLFPWTNSGRSLSIGRSEGITKGLFDTKIGKILGMGICGTNASELIAEA
TLAIEMGCDMDDIALTIHAHPTLSETTAFATEMAQGTITDLLSSKKKK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgattaagactcaaattgttattataggctctggtcctgggggttatacagctgccttt
cgtctggcagatttaggtaaacaagttactctaattgaacgttataacgctttaggtggt
gtatgcttaaatgtcggctgtattccttctaaagcacttcttcatacagcccaaatcatc
aatgaagcaaaagatgcctcacatgtaggtgttacctttaatgaaccattaattagcatt
aatggtatacgtacaaataaagacaacatcgtaaccaaactaacaaatggtataaaaact
ttagcaaaagcaagaaaaattaatgttataacaggttatggaagatttatctcagctaat
caaattacaatcgaaaatagcgatgatattattgaatttgaacaatgtattattgctaca
ggttcgcaagttaccaaaatccccacccttccatttgatgatgctcgtgtaatgagttca
acagatgcactaaacttatccaatataccaaaacgtttgttagtggtaggtgggggtatt
attggcttagaaatggcaacagtttataacgcgcttggtagcgaaattactgtggttgaa
ctttctgaccaactaattactagtgccgacaaagacattatcaatccactacttagacgc
attaaaaaacaatatgctaacatctttttaaacaccaaaataaccaaaattgaggcatta
aaagaaggtattaaagtcagatttgagggaaaaaacaccccaaaattcgacacctttgat
aaaatactagtcgctattggtcgcacccctaatggaagattgatcgattgtgaaaaagct
ggtgttgaaataaatgattggggctttattcctgtcaataaacaaatgaaaaccaatgtt
aataacatctacgccattggcgacattattggtcaacctatgcttgcccataaagccata
cacgaagctaaaattgcagcagaagtcatttgcggatacaaatcaggttttaatgccctt
accatcccatctattgcctatactgatccagaaattgcttggacaggaaaaacagaaaaa
gaactcaaagctgaaggaatctcttatgaaaaaggtttatttccttggacaaattcaggt
cgtagtttaagtattggtagatctgaaggcattactaaagggttgttcgatacaaaaata
ggcaaaattttaggaatgggtatttgcggtaccaatgcaagtgagttgattgctgaagca
acactagctattgaaatgggttgtgatatggatgatattgcactaactatccacgcccac
ccaaccttaagtgaaactaccgcctttgcaactgaaatggcacaaggtacaattacagat
ttattatcatcaaaaaagaaaaaatag
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