Veillonella orientalis: VEIS_05380
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Entry
VEIS_05380 CDS
T10808
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vor Veillonella orientalis
Brite
KEGG Orthology (KO) [BR:
vor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vor03016
]
VEIS_05380 (truB)
Enzymes [BR:
vor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VEIS_05380 (truB)
Transfer RNA biogenesis [BR:
vor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VEIS_05380 (truB)
Prokaryotic type
VEIS_05380 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BBU36017
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All DBs
Position
617502..618443
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AA seq
313 aa
AA seq
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MDGVLPFLKPPGITSHDAVAICRRILNEKRIGHSGTLDPMAYGVLPVFLGKATRLIEYTD
GFDKTYVAECKFGTFTDTEDSSGQPVLPDNDMVLRDGVLLNESSQSSELSDAIVKPTFEE
LVNTLNTFFGVQNQRPSKYSAIKVNGIRAYEYARKGLPVELPLRKIHIKNIELLAYGFPY
FTVRVTCSGGTYIRSLLRDICVSLGIPGTMTSLVRTQVGPFDIGSAKMAEELMIHGESLL
LPTDTAVSHLSKVTVNSVQLKMMVQGKQLSIDSEFSYTKPDHYYRAYGPHGFIGIMKRTN
HTLKVEKNIFIEG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggatggcgttttaccatttttaaaacctcctggaataacaagccatgatgctgttgcc
atttgtcgccgcattttaaacgagaagcgcataggacatagtggtactttagatcctatg
gcttatggtgtattgccagtatttcttggtaaggctacgcgacttattgaatacactgat
ggttttgataaaacctatgtggcagaatgtaaatttgggacttttacagatactgaagat
agttcaggtcaacccgtattgcctgataatgacatggtattgcgagatggcgttctatta
aatgaatcgtctcaaagttcagaactttctgatgctatagtaaagccgacttttgaagaa
ttagtcaatacattaaatacgttcttcggagttcaaaatcagagaccatcaaaatattcc
gctattaaagtaaatggtattcgtgcttatgaatatgcccgtaaaggtcttcctgtagaa
ttgccattacggaaaattcatataaaaaatattgagcttctagcgtatggatttccatat
tttacagttcgtgtaacatgctctggaggcacttatattcgttcattattacgtgatata
tgtgtttcattaggtataccaggaacgatgacatctttggtgcgtactcaagtagggccc
tttgatattggttctgcaaaaatggctgaggaactgatgattcatggtgaaagcctattg
ttaccaacggatacagcagtttcacatctttcaaaagtaacggtaaatagtgtacaatta
aagatgatggttcaaggtaaacaattatctattgatagtgaattttcctataccaaacca
gatcattattatagagcctatggtcctcatggattcattggtattatgaaacgaacaaac
cacacattaaaggtggaaaaaaatatttttattgaaggataa
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