KEGG   Veillonella orientalis: VEIS_09540
Entry
VEIS_09540        CDS       T10808                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
vor  Veillonella orientalis
Pathway
vor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VEIS_09540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vor03019]
    VEIS_09540
Messenger RNA biogenesis [BR:vor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     VEIS_09540
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_KhpA-B HDOD KH_2 PetM
Other DBs
NCBI-ProteinID: BBU36433
LinkDB
Position
complement(1066745..1068310)
AA seq 521 aa
MRQILEDVGHILEYCLIAVVMVLIGLGAGYFFRKNIAEGKLNQAEQEAARIIANGERTAE
SKKKEALLEAKEEIHKLRSDVERENKDRRSELQRMERRILQKEESLDKKLDNIEHKEEAL
HRKEADLAQSREKIEALYEKQMAELERISGMTFEEAKNILLTNVEQEIRHETAIMVKEME
QQAKDDAEKKAKEIISSAIQRCAADHVAETTVSVVALPNDEMKGRIIGREGRNIRALETL
TGIDLIIDDTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVGKARKEVDQTI
KEAGEQATFEADVHGLHPEIVKILGRLKYRTSYGQNVLKHSIEVSHLAGLMAAELGCDVT
LAKRGGLIHDIGKALDRELEGSHVQIGVDVARKYRESAAVINCIGAHHGDEEFQSVEAVL
VAAADAISAARPGARRETLENYLKRLSKLEEIAESFEGVEKCFAIQAGREIRVVVKPDKI
DEAESTLLVRNIVKRIESELEYPGQIKVVIIRETRVVDYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
gtgagacagattttagaagatgtgggacatattttagagtattgtctaattgcagtggta
atggtactgattggactaggggcaggctatttttttagaaaaaatattgctgaaggaaaa
ctgaatcaagctgaacaagaggctgcacgcatcatcgcaaatggtgagcgcacagctgag
tctaaaaagaaagaagctttattagaagcgaaagaagaaattcataagctccgttctgat
gtagaacgagaaaataaagatcgccgttctgaacttcaacgtatggaacgtcgtattctt
caaaaagaagaatctttggataaaaaattagacaatattgaacacaaagaggaagcttta
catcgcaaagaagctgacttagcccaaagccgtgaaaaaattgaagctttgtatgaaaaa
caaatggcagagttagaacgtatttctggcatgacatttgaagaagctaagaatatcttg
ttaacaaatgtagaacaagaaattcgtcatgaaacggcaattatggttaaggaaatggag
cagcaagctaaggatgatgcggagaaaaaagcaaaagaaattatctcctctgcaatccaa
cgttgcgcagctgaccatgtggcggagactaccgtatccgtagtggcattgcctaatgat
gaaatgaaaggccgcattattggtcgtgagggccgtaatattcgcgcactcgaaacatta
acaggtattgatttgattatcgatgacacaccagaagcagttattctttctggcttcgac
ccaattcgtcgtgaagtggctcgtattgctttagaaaaattgattgtagatggtcgtatc
catccagctcgtattgaagaaatggttggtaaagctcgtaaagaggttgaccaaactatt
aaagaagctggtgaacaagcaacatttgaagctgatgttcatggcttacatcctgaaatt
gttaagattttaggtcgtttgaaatatcgtactagttacggtcaaaacgttttgaaacat
tctattgaagtatctcatttagcaggtttgatggcagctgaactaggctgtgatgtaaca
ttggctaaacgaggtggtttgatccatgatattggtaaagcattagaccgtgaacttgaa
ggttctcatgttcaaatcggtgttgatgtggctcgtaaatatcgtgaaagcgcagcagta
attaactgcattggcgctcatcatggtgatgaagagttccaatctgtagaagctgtatta
gtagcagctgctgatgctatctctgcggctcgtccaggagcacgtcgagaaacattagaa
aactacttaaaacgtttatctaaattggaagaaatcgctgaatccttcgaaggcgttgaa
aaatgctttgctattcaagcaggtcgtgagattcgcgttgtagtaaaaccggataagatt
gatgaagctgagtctacattacttgttcggaatatcgtaaaacgcatcgagtctgaactc
gaatatccaggccaaattaaggtcgtaattattcgtgaaactcgcgttgtggattacgca
aaataa

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