Vibrio ostreae: KNV97_01020
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Entry
KNV97_01020 CDS
T08661
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vos
Vibrio ostreae
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vos03016
]
KNV97_01020 (rnb)
Enzymes [BR:
vos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KNV97_01020 (rnb)
Transfer RNA biogenesis [BR:
vos03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KNV97_01020 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
MCR_gamma
Motif
Other DBs
NCBI-ProteinID:
QXO16139
UniProt:
A0A975U921
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All DBs
Position
2:complement(228169..230196)
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AA seq
675 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGQIKATDKGFGFLEVDSKTSFFIPPPYMKKCMHGDKV
VAIIRTEKEREVAEPQELVEPSLTRFIGRVQLHKGKLNVAPDHPQLKKTPLKAKTKKGVN
PEQFKEGDWVVAHLTRHPLKDDNGFFVEISEKITDADDKIAPWWVTLAENDLPNSEPAGI
DEWQLKDDADLERIDLTDMPFVTIDGESTKDMDDALYAKQLDNGSFELTIAIADPTAYIT
PEDNMDKVARERGFTIYLPGRNIPMLPRDLADELCSLIENQVRPALCCSVTVDKDGVIGD
DIRFFAANIKSHARLVYDHVSDWLENGSSDAWQPDETIAAVVRDLHAFAQARANWRETHA
VVFPDRPDYRFELSEDNDVIAIHADSRRTANRLVEEAMITANICAGKTLQASFGTGVFNT
HAGFKPEKLADVVELMNEHGAEIDAENVATVEGFAALRRWLSAQETAYLDNRIRKSQSYS
EIGNEPLPHFAMGLDVYATWTSPIRKYGDMINHRMLKAHILGKESVQKPDETVGEELALH
RKHHKIAERNVADWLYARTLAEEPAKGTRFNAEIFDINRAGMRVRLLENGAAAFIPGGLI
LDNKQRLECNGEQGTVSVDKEVVFKLGDTLEVVLNEVNQENRSLIAKPTQVFADLPQAEP
AAHQEPAAQEQSTEA
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatccgctactagcccaactcaaacaacaaatccaagaaaacctgccg
aagaaagaaggtcagatcaaagccactgataaaggttttggtttccttgaagtcgacagc
aaaaccagtttctttatcccgcctccgtatatgaagaaatgtatgcatggcgataaagtc
gtggctatcattcgcactgaaaaagagcgtgaagtcgcagagccgcaagagctggttgaa
ccttctctgacgcgatttattggtcgggtacaactgcacaaaggcaaactgaacgttgcg
ccggatcacccgcaactaaagaaaacaccgctgaaagccaaaacgaaaaaaggcgtcaat
ccggagcagtttaaagaaggtgactgggttgtcgcgcatctgactcgtcacccacttaaa
gatgacaacggtttcttcgttgaaatctcagaaaaaattacggacgcggatgacaaaatc
gcaccttggtgggtaacgctggcagaaaatgatctgccaaacagcgagccagccgggatt
gacgaatggcaactgaaagatgacgccgatcttgagcgtatcgatctgactgatatgcca
ttcgttactatcgatggcgagtcaaccaaagatatggatgacgcgctgtacgccaagcaa
ctggataacggtagctttgagctgaccattgcgattgccgatccgacagcctatatcacg
ccggaagataacatggacaaagtagcgcgtgagcgtggctttactatttatctgccaggc
cgcaacatcccgatgctaccgcgcgatctggctgacgagctgtgttctctgatcgaaaat
caggtgcgccctgccctttgctgtagcgtgactgtcgataaagatggcgtgattggtgat
gatattcgtttctttgctgctaacatcaaatcgcacgcgcgtctggtttacgatcacgta
tcagactggctggaaaatggcagcagcgatgcgtggcagcctgatgaaaccatcgctgcc
gtcgtgcgcgatctgcacgcttttgcccaggcacgcgcgaactggcgtgaaactcatgcc
gtggtcttcccggatcgtccggactaccgctttgagctgagcgaagacaacgatgtgatc
gcgattcacgctgactctcgtcgcactgctaaccgtctggttgaagaagccatgatcacc
gccaacatctgtgccggtaaaacgttgcaggcttcctttggtaccggcgtgttcaacact
cacgctggcttcaaaccagaaaaactggccgatgttgtggaactgatgaacgagcacggc
gcggaaatcgatgccgaaaatgtagcaactgtagaaggctttgccgcgctgcgccgttgg
ttgtctgctcaggaaaccgcttacctggataaccgtatccgtaagagtcagagctacagt
gaaatcggcaacgagccgctgccgcatttcgccatgggtctggacgtgtacgcgacctgg
acatcaccgatccgtaagtacggcgatatgatcaaccatcgcatgctgaaagctcacatc
ctcggtaaagagtcggtacaaaagcctgacgaaaccgttggtgaagagctggcgctgcat
cgtaaacaccacaaaattgccgaacgcaatgtcgcagactggctgtacgctcgcactctg
gctgaagagccggccaaaggcacgcgctttaacgccgagatctttgacatcaaccgcgca
ggcatgcgtgtccgtctgctggaaaatggcgccgctgcctttattcctggcggcctgatt
ctggacaacaagcagcgtctggaatgcaacggcgagcaaggcaccgtatcggtcgataaa
gaagtggtgttcaagctgggtgataccctggaagttgtcctgaatgaagtcaaccaggag
aaccgcagcctgattgcaaaaccaactcaggtgtttgcagatctgccacaagcagagcca
gccgctcatcaggaacctgctgctcaggaacagagcaccgaggcctaa
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