Vibrio ostreae: KNV97_06685
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Entry
KNV97_06685 CDS
T08661
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vos
Vibrio ostreae
Pathway
vos03030
DNA replication
vos03430
Mismatch repair
vos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KNV97_06685 (dnaE)
03430 Mismatch repair
KNV97_06685 (dnaE)
03440 Homologous recombination
KNV97_06685 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vos03032
]
KNV97_06685 (dnaE)
03400 DNA repair and recombination proteins [BR:
vos03400
]
KNV97_06685 (dnaE)
Enzymes [BR:
vos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KNV97_06685 (dnaE)
DNA replication proteins [BR:
vos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KNV97_06685 (dnaE)
DNA repair and recombination proteins [BR:
vos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KNV97_06685 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QXO17996
UniProt:
A0A975UC14
LinkDB
All DBs
Position
1:116016..119495
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRVHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYGTAHGC
GIKPIVGADFAVRSDEFGDELTRITVLAKNNQGYKNLTLLISDAYLRGHVQHQPVIDKEW
LVKYSEGLILLSGAKSGDIGRALLKGNQALVEKCVEFYQTHFADHFYLELVRTGRADEES
YLHFALELAEQTDLPVVATNDVVFLEPEQFDAHEIRVAIHDGYTLEDPRRPKNYSAQQYL
RSEEEMCNLFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMLETEFLVKKSQQGL
EERLEFLFPDPAVRAERRPAYDERLEIELQVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDLVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKMIPPDPGMTLEKAFKAEPA
LPELYEADEEVKELIDMCRILEGCTRNAGKHAGGVVISPTSITDFAPLYCDAEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGLINPRREKAGEAPVRIESIPLADPASFRVL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRAIFQSGAENNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECMRMGLTVLPPDINSGLYRFNVDDAGAIVYGIGAIKG
VGEGPIEAILEARSQGGYFKDLFDFCARIDLKKVNKRVIEKLILAGAMDRLGPHRAALMA
SLSDAVKSASQHHQAEAFGQTDMFGVLTDAPEEVEQKYTQVDEWPEKVWLEGERETLGLY
LTGHPINAYLKELNKYTSCRLNEATPTRRDQSVTVAGLVIAARVMTTKRGNRIGIMTIDD
RSGRMEVMLFSDALDRYADLLETDKILVISGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGLSVSIEQSQINEQFFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDT
LLDELKQLLGKDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacccaaagtttatccacttacgtgttcacagtgatttctccatggttgacggc
ctgtcaaaagtgccgccgctggtgaaaaaagtggcagcaatgggcatgccggcaatggcc
ctgaccgacttcaccaacttatgtggtctggtgaaattctatggcactgcgcatggctgt
ggtatcaagccgattgtcggcgctgactttgccgtgcgttctgacgagtttggcgatgag
ctgacccgcattactgtcctggccaaaaataatcaaggctacaaaaatctgaccctgctg
atctccgacgcgtatctgcgtggtcatgtacagcaccagccggtgattgataaagagtgg
ctggtgaaatattccgaaggcctgatcctgctgtccggtgcgaaaagcggtgatatcggc
cgtgcgctactgaaaggcaatcaggccctggtggagaaatgcgtcgagttttaccagacc
cattttgctgaccatttttatcttgaactggtacgtaccggacgtgccgatgaagagagt
tatctgcattttgcccttgaactggctgaacagaccgacctgccggtagtggcgaccaac
gacgtggtatttcttgaaccggaacagttcgatgcccatgaaatccgggtcgcgattcac
gatggttacaccttagaagacccgcgccggccaaagaactacagcgcgcaacagtatctg
cgcagtgaagaagagatgtgcaatctgtttgccgatattccggaagcgctggaaaacagt
gtcgagattgccaagcgttgtaacgtgaccgtgcgtctgggcgaatatttcctgccggca
ttcccgaccgaggggatgctggaaaccgaattcctggtcaaaaagtctcagcaaggtctc
gaagagcgtctggaattcctgtttccggatcctgccgtgagagccgagcgtcgcccggct
tatgatgagcgtctggagatcgagctgcaggtgatcaaccagatgggattcccgggttac
ttcctgatcgtaatggagttcatccagtggtcgaaagataatgatattccggtaggcccg
gggcggggctcaggtgccggttctctggtggcttacgcactgaaaatcaccgatttggat
ccgcttgaatacgatttgctgttcgaacgcttccttaacccggagcgggtatccatgccc
gatttcgacgtcgatttctgtatggataagcgcgatctggtgatcgatcacgtggcggaa
atgtacggtcgtgatgcggtatcacagatcatcacctttggtaccatggcggcgaaagcg
gtaattcgcgatgtgggccgggtgctgggccacccgtttggttttgtcgatcgcatctcg
aaaatgatcccgccagatcctggtatgacgctggaaaaagcgtttaaagccgaaccagct
ttgccggagctgtacgaagccgacgaagaagttaaagaactgatcgatatgtgtcgcatt
ctggaagggtgtacacgtaacgccggtaaacacgcgggcggggtggtgatttccccgacc
tcgattaccgatttcgcgcctttgtattgtgatgccgaaggccaccatccggtgactcag
tttgacaagaacgacgtcgaatatgccggtctggttaagtttgacttccttggcctgcgt
accctgaccatcatcgactgggcgctggggctgattaacccgcggcgtgaaaaagccggt
gaggcgccggtgcgtatcgagtcaattccgctggcggatccggcctcgttccgggtattg
caaaactcagaaaccaccgcggtattccagctcgaatcgcgcgggatgaaagagctgatt
aaacgtctgcagccggactgttttgaagacatcatcgcactggttgctctgtttcgcccc
ggcccgctgcaatcgggcatggtagataactttatcgaccgtaagcatggtcgtgaagcc
atttcctatccggatgaaaaatggcagcacgagtcgctgaaagagatcctggagccgacc
tacggcatcattctctatcaggaacaggtgatgcagatcgcccaggttctggctggctac
accctgggtggtgcggacatgctgcgccgggcgatgggtaagaaaaagccggaagagatg
gccaaacagcgggctattttccagtcaggcgctgaaaataacggtgttgacggcgaactg
gcaatgaaaatcttcgatctggtggaaaaatttgccggatacgggtttaacaaatcgcac
tcagccgcctatgctttagtatcgtaccagacgctatggctcaaaactcactacccggcc
gagttcatggcagcggtcatgaccgcggatatggacaacaccgagaaagtggttggtctg
gtcgatgagtgcatgcgcatggggctgaccgtgctgccaccggacatcaactccggtctg
taccggtttaacgtcgatgatgccggcgcgattgtctatggtatcggggcgattaaaggt
gttggtgaaggcccgattgaagcgattcttgaagcgcgtagtcagggcggttattttaag
gatctgtttgatttctgcgcgcggattgacctgaaaaaagtcaacaaacgggtgattgag
aagctgattctggccggtgcgatggaccgcctcgggccgcatcgcgcagcgctgatggcc
tcattaagcgatgcggtgaaatcagccagtcagcatcaccaggccgaagcgtttggtcag
accgatatgtttggtgtcctgaccgatgcgccggaagaggtggagcagaaatacactcag
gtcgatgaatggccggaaaaagtgtggctggaaggggaacgcgagacattgggtctttac
ctgacggggcatccgattaatgcttacctgaaggaactcaataagtacaccagttgtcga
ttgaatgaggccacgccaacccgacgcgatcagtcggtgactgtggccggtctggtcatc
gcagcacgggtcatgaccaccaaacgcggtaaccggattggtatcatgacgattgatgat
cgtagtggccggatggaagtgatgttattttccgatgcgctggatcgctatgcagatttg
ttagaaacagataaaattttggtcatttccggacaggtcagctttgatgacttcaacggt
ggccttaaaatgtcggcgcgcgaagtcatggacttgggcagcgcgcgtgaaaaatatgcc
cgaggcttgtcggtttcgattgagcaatcgcagatcaatgagcagttttttgagcgcttt
agtcacatcttagagcctcaccgagcagggactgtccctgtcaatgtatactaccagcgc
ccagatgcgcgagcacgcctgacgttaggcaccgagtggcgtgtcactccaagcgataca
ttgttagacgaattaaaacagttgcttggcaaagaccaggtagaactcgaatttaactaa
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