Vibrio ostreae: KNV97_09500
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Entry
KNV97_09500 CDS
T08661
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vos
Vibrio ostreae
Brite
KEGG Orthology (KO) [BR:
vos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vos03032
]
KNV97_09500 (topA)
03400 DNA repair and recombination proteins [BR:
vos03400
]
KNV97_09500 (topA)
Enzymes [BR:
vos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KNV97_09500 (topA)
DNA replication proteins [BR:
vos03032
]
Prokaryotic type
DNA Topoisomerases
KNV97_09500 (topA)
DNA repair and recombination proteins [BR:
vos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KNV97_09500 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QXO18486
UniProt:
A0A975UCF1
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Position
1:732229..734859
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AA seq
876 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTATKKKAAPVSTKELSA
EEKARLKKEKDRAALIKKMGIDPYHDWEANYQILPGKEKVVAELQKLAKDADSVYLATDL
DREGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFQQPGELNMAGVNAQQARRFMD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFVPEEFWDIHADTLTPGHE
AFRLLVAQKDGMAFKPSNETDAMASVAALQKARYEVCKREDKPTSSKPSAPFITSTLQQA
ASTRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSSEAVGAVRDYITSEFGDAYLPGKP
NVYGSKEGAQEAHEAIRPSSVSVKAEDLEGMEADAHKLYALIWNQFVACQMTPAKYDSTT
VSVKADEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPAVQVGETLALEKLDPKQHFTKP
PARYTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFYAEKMGEIVTDRLDDS
FEDLMNYDFTARMEQKLDQIAEGETNWKGVLDNFFEDFSHNLEQAEQDEDHGGMKPNHIV
MTDILCPTCERPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIINVLEEDVETA
ALRAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCDGYIVEKGEFKVKGYDGPVVECDKC
GSDMVLKNGRFGKYMDCTSETCKNTRKILKNGEVAPPKEDPVHFPELPCENSDAYFVLRD
GASGLFFAASNFPKSRETRAPLVEELAKYKDRISEKFHYLADAPTHDPDGRPAVVRFSRK
SKEHYVRTEDDGKPSGWTALFNDGKWEITDKRKNAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactcgttatagtggagtcgccagccaaggccaaaacgatcaataaatat
cttggcaaagactttattgttaagtctagtgtcggtcatgtccgcgatctgccaaccgcc
ggtcaaagcacggcgacgaaaaagaaagccgcacctgtctcaaccaaagagctaagtgca
gaagaaaaagcacgcctgaagaaagagaaggaccgtgctgcactgatcaagaaaatgggt
attgacccataccatgattgggaagccaactaccagattctacccggcaaagaaaaagtc
gttgccgaactgcaaaagttagcgaaagacgcagacagcgtttatctcgcaaccgatttg
gaccgcgagggagaggctatcgcttggcaccttcgtgagatcatcggtggcgatgaagag
cgatataaacgtgttgtgtttaacgaaatcactaaaaacgccattcagcaagctttccag
cagcctggagagttgaacatggctggcgtgaatgctcagcaggcccgtcgttttatggat
cgcgtggtgggctttatggtgtcaccgctgctttggaaaaaagtggcacgaggcctatca
gccggtcgcgttcagtctgtggcggtaaaactgttggtggagcgtgagcgcgaaattaaa
gcgtttgtaccggaagagttctgggatatccacgctgacactctgacaccgggtcacgaa
gcattccgtctgttggtggctcagaaagacggtatggccttcaaaccgtctaacgaaacc
gatgccatggcttcagtagctgcgctgcaaaaagcgcgctacgaagtgtgtaagcgcgaa
gacaagccaaccagcagtaaaccgtcggcgccgtttatcacctcaaccctgcagcaggcg
gccagtacgcgtctgggctacggtgttaagaaaaccatgatgctggctcagcgtttgtat
gaagcgggttatatcacttatatgcgtaccgactcgactaatctgagttcagaggcggta
ggcgcggtacgtgactacattaccagtgaatttggtgatgcctacctgcctggtaagccg
aacgtttacggcagcaaagaaggtgctcaggaagcgcacgaagcgattcgtccttcaagc
gtgtccgttaaagcggaagacctggaagggatggaagcggacgctcacaaactgtatgca
cttatctggaaccagtttgtcgcttgtcagatgacgccggccaaatacgattcaaccacc
gtcagcgttaaagcggacgagtacacgctgaaagcgaaaggtcgtattctcaaatttgat
ggctggactcgcgtacagcgtcctctgggtaaaaatgaagaccagattctgccagcggtc
caggttggtgaaactctggctctggaaaaactggatccgaaacagcactttactaagccg
ccggcacgttacaccgaagctgcgctggttaaagaactggaaaaacgtggtatcggccgt
ccttcaacctacgcatccatcatctcgaccattcaggatcgtggctacgtcaaagttgat
cagcgccgtttctacgctgagaagatgggtgagatcgtgaccgaccgcctggatgacagt
tttgaagatctgatgaactacgattttaccgcccgcatggaacagaaactggaccagata
gcggaaggtgaaaccaactggaaaggtgtgctggataacttctttgaagacttcagccac
aatctggaacaagctgagcaggatgaagatcacggcggtatgaagccgaaccatatcgtg
atgaccgatattctttgcccgacctgtgagcgcccgatggggattcgtacggcctcgacc
ggtgtgttcctggggtgttccggttatgcgctgccaccgaaagagcgttgtaagacaacg
atcaacttaggcgatgaagagggcattatcaacgttctggaagaagacgttgaaaccgct
gcactgcgtgccaagaagcgttgtcctatctgtgaaaccgcaatggatgcgtaccttatc
gatgataagcgtaagttgcatgtgtgtggtaacaacccgaactgcgacggctacattgtt
gagaagggtgagtttaaggtgaagggctacgatggccctgtggttgagtgtgacaaatgt
ggttctgatatggtgctgaaaaacggccgtttcggaaaatacatggattgcaccagcgaa
acctgtaagaacacacgtaagattctgaaaaacggagaagtggcaccgccaaaagaagat
ccggttcacttccctgagttaccgtgtgagaactcagacgcgtactttgttctgcgtgat
ggcgcgtcaggtctgttctttgcggcaagcaacttcccgaaatcacgggaaacccgtgcg
ccgttggtagaggagctggcgaaatacaaagatcgtatttcagagaaattccattatctg
gccgatgcgccgactcatgacccggatggtcgtccggcagtggtccgcttcagtcgtaaa
agtaaagagcattacgtacgtactgaagatgacggcaaaccgtcaggatggacggcgctg
tttaacgacggtaagtgggaaatcacggataagcgtaagaacgccaaataa
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